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"Pérez, Jesús M"
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Genomics reveal local skin immune response key to control sarcoptic mange in Iberian ibex (Capra pyrenaica)
by
López-Olvera, Jorge Ramón
,
Puigdecanet, Eulàlia
,
Serrano, Emmanuel
in
Analysis
,
Animal Genetics and Genomics
,
Animals
2024
Background
Sarcoptic mange is an emerging and neglected contagious skin disease caused by the mite
Sarcoptes scabiei
, affecting humans, domestic animals, and wildlife. Mange is the main disease and a major concern for the management and conservation of populations of Iberian ibex (
Capra pyrenaica
), a medium-sized mountain ungulate endemic to the Iberian Peninsula and Northern Pyrenees. Differences in host-parasite interaction and host immune response determine mange clinical outcome, but little is known about the related differences in gene expression. This study determined blood and skin gene expressions in
S. scabiei
-experimentally infested Iberian ibexes.
Results
Infestation with
S. scabiei
promoted immune and inflammatory genomic responses both in skin and blood, with two different clinical outcomes: either severe infestation or recovery.
Sarcoptes scabiei
induced local skin immunosuppression to favour its multiplication and establishment of the infestation in the host. Skin gene expression was mostly inflammatory and inefficient to control mange in the severely infected ibexes. Conversely, the immune skin response of the recovered ibexes effectively recognised
S. scabiei
and activated T-cells, limiting the infestation. Consequently, inflammation-related genes were more expressed in the blood of the severely infested ibexes than in those that recovered.
Conclusions
The results demonstrate that skin local cellular immune response is key to control sarcoptic mange and prevent the systemic spread of the disease and the associated inflammatory response. These results will be useful to understand the pathogenesis and drivers of the differential outcome of mange at individual scale, and the population and ecological consequences of such variability in Iberian ibex, as well as in other wildlife species, domestic animals, and humans.
Journal Article
Improving population size estimation at western capercaillie leks: lek counts versus genetic methods
2025
The western capercaillie Tetrao urogallus, hereafter capercaillie, is the largest galliform bird present in the boreal and montane forests of the Western Palearctic. Precise and accurate methods for estimating the number of individuals and/or their densities are crucial for the proper management of its free‐ranging populations. However, obtaining reliable estimates of the abundance of populations of wild species and, particularly, of birds is not a simple task. In the case of lek‐mating birds such as capercaillie, surveys are traditionally based on lek counts, that is, counts of calling males present in their mating areas: the leks. This study was carried out on the Pyrenees at six capercaillie leks where two different lek counting approaches were performed: hide‐based and walk‐based. The results were compared with those obtained from an estimate of minimum population size (MPE) derived from genotyping all faeces samples found in the lek area, and with a population size estimate derived from a genetic mark‐recapture model (N^o) of each capercaillie lek. The results of N^o were used to estimate the detection rate (D) of both lek count approaches. Our results show that traditional lek counts do not detect all male capercaillies since the detection rate was 0.34 (95% CI: 0.26–0.43) for hide‐ and 0.56 (95% CI: 0.43–0.68) for walk‐based lek counts. Our results suggest that the walk‐based lek counts were more efficient than the hide‐based ones, providing more accurate results compared to the N^o estimate. The combination of non‐invasive sampling with genetic mark‐recapture model was found to be the most reliable method for obtaining the N^o of leks given that traditional lek counts underestimate the number of capercaillie and, furthermore, can cause disturbance to the species at these sites.
Journal Article
Detailed morphological structure and phylogenetic relationships of Degeeriella punctifer (Phthiraptera: Philopteridae), a parasite of the bearded vulture Gypaetus barbatus (Accipitriformes: Accipitridae)
by
Liébanas, Gracia
,
Pérez, Jesús M.
,
Fraija-Fernández, Natalia
in
20th century
,
631/158
,
631/208
2023
Habitat loss is one of the main threats to species survival and, in the case of parasites, it is their hosts that provide their habitat. Therefore, extinction even at local scale of host taxa also implies the extinction of their parasites in a process known as co-extinction. This is the case of the bearded vulture (
Gypaetus barbatus
), which almost became extinct at the beginning of the twentieth century. After several attempts, this species was successfully reintroduced into the Alps at the end of the twentieth century. We collected 25 lice specimens from an electrocuted bearded vulture from Susa (Italian Alps) that were morphologically identified as
Degeeriella punctifer
. Six individuals were studied by scanning electron microscopy, with particular emphasis on their cephalic sensorial structures, while four further specimens were characterized at molecular level by amplifying partial regions of the
12SrRNA
,
COX1
and elongation factor 1 alpha (
EF
-1) genes. From a morphological perspective, the number, type and arrangement of the sensillae on the two distal antennal segments is quite similar to that of other species of the family Philopteridae (Phthiraptera: Ischnocera). The mandibles and tarsal claws allow lice to cling firmly to their host’s feathers. Phylogenetic analyses help unravel the paraphyletic nature of the genus
Degeeriella
and demonstrate the clear differentiation between lice parasitizing Accipitriformes and Falconiformes, as well as the close relationship between
D. punctifer, D. fulva, D. nisus
and
Capraiella
sp. that, along with other genera, parasitize rollers (Aves: Coraciiformes).
Journal Article
Molecular Analyses Reveal Unexpected Genetic Structure in Iberian Ibex Populations
2017
Genetic differentiation in historically connected populations could be the result of genetic drift or adaptation, two processes that imply a need for differing strategies in population management. The aim of our study was to use neutral genetic markers to characterize C. pyrenaica populations genetically and examine results in terms of (i) demographic history, (ii) subspecific classification and (iii) the implications for the management of Iberian ibex.
We used 30 neutral microsatellite markers from 333 Iberian ibex to explore genetic diversity in the three main Iberian ibex populations in Spain corresponding to the two persisting subspecies (victoria and hispanica). Our molecular analyses detected recent genetic bottlenecks in all the studied populations, a finding that coincides with the documented demographic decline in C. pyrenaica in recent decades. Genetic divergence between the two C. pyrenaica subspecies (hispanica and victoriae) was substantial (FST between 0.39 and 0.47). Unexpectedly, we found similarly high genetic differentiation between two populations (Sierra Nevada and Maestrazgo) belonging to the subspecies hispanica. The genetic pattern identified in our study could be the result of strong genetic drift due to the severe genetic bottlenecks in the studied populations, caused in turn by the progressive destruction of natural habitat, disease epidemics and/or uncontrolled hunting.
Previous Capra pyrenaica conservation decision-making was based on the clear distinction between the two subspecies (victoriae and hispanica); yet our paper raises questions about the usefulness for conservation plans of the distinction between these subspecies.
Journal Article
Evictions, Foreclosures, and Global Housing Speculation in Palma, Spain
2022
Over the last two decades, the property bubble and the subsequent economic crisis and post-crisis policies have heightened urban inequalities, mainly in cities in southern Europe. The gaps between social classes have widened with the configuration of new urban spaces characterized by segregation and exclusion. Palma is the capital of one of the top tourist destinations in the Mediterranean (the Balearic Islands) and it is usually regarded as a successful tourism model and a land of opportunity for property investors. Nevertheless, serious problems of inequality exist in the city. The centre of this dual city is split between a process of spreading gentrification and the urban blight of its poor neighbourhoods. Son Gotleu is a particular case in point. The neighbourhood is home to a large number of social housing blocks (1960s) with residents from mostly migrant backgrounds. Within a global context of new redefined rent-seeking mechanisms, this article analysed impoverishment in Son Gotleu, based on three variables associated with housing: evictions, foreclosures and the property market. Our study shows that evictions were a determining feature of impoverishment, linked to the emergence of new speculative investment interests. Indeed, investment funds are very probably the most influential urban agents today.
Journal Article
Ibiza (Spain) World Heritage Site: Socio-Urban Processes in a Touristified Space
2022
In recent years, there has been a big shift in analyses of historic centres, with the spotlight turning from the issue of urban degradation and the ageing population to studies of the risks associated with touristification and gentrification. The island of Ibiza is one of the Mediterranean’s leading tourist destinations, and its capital is one of the fifteen Spanish cities declared as World Heritage Sites (UNESCO). This study aimed to explore the touristification of Ibiza’s historic centre (a World Heritage Site). To do so, it explored three interrelated variables, the historic centre’s demographic dynamics, tourist accommodations, and heritage, through an analysis of heritage interventions derived from the UNESCO declaration. The methodology was based on the statistical use of demographic and tourism accommodation data on an inter-urban scale by mapping the main results, as well as on a study of the heritage data from the municipal catalogue. We concluded that the old city is in a state of change, both socially (with a demographic decline and drop in the native population) and culturally. All this reinforces its role as a supplier of complementary tourism services and as a museumized space for sun and sand resorts in the rest of the city and throughout the island.
Journal Article
Sarcoptic mange in wild ruminants in Spain: solving the epidemiological enigma using microsatellite markers
by
Tizzani, Paolo
,
Oleaga, Alvaro
,
Mentaberre, Gregorio
in
Alleles
,
Animals
,
Animals, Wild - parasitology
2021
Background
In Spain, sarcoptic mange was first described in native wildlife in 1987 in Cazorla Natural Park
,
causing the death of nearly 95% of the local native population of Iberian ibex (
Capra pyrenaica
). Since then, additional outbreaks have been identified in several populations of ibex and other wild ungulate species throughout the country. Although the first epizootic outbreak in wildlife was attributed to the introduction of an infected herd of domestic goats, the origin and the cause of its persistence remain unclear. The main aims of this study are to understand (i) the number of
Sarcoptes scabiei “
strains” circulating in wild ruminant populations in Spain, and (ii) the molecular epidemiological relationships between
S. scabiei
and its hosts.
Methods
Ten
Sarcoptes
microsatellite markers were used to characterize the genetic structure of 266 mites obtained from skin scrapings of 121 mangy wild ruminants between 2011 and 2019 from 11 areas in Spain.
Results
Seventy-three different alleles and 37 private alleles were detected. The results of this study show the existence of three genetic strains of
S. scabiei
in the wild ruminant populations investigated. While two genetic clusters of
S. scabiei
were host- and geography-related, one cluster included multi-host mites deriving from geographically distant populations.
Conclusions
The molecular epidemiological study of
S. scabiei
in wild ruminants in Spain indicates that the spreading and persistence of the parasite may be conditioned by host species community composition and the permissiveness of each host population/community to the circulation of individual “strains,” among other factors. Wildlife–livestock interactions and the role of human-driven introduction or trade of wild and domestic animals should be better investigated to prevent further spread of sarcoptic mange in as yet unaffected natural areas of the Iberian Peninsula.
Graphical Abstract
Journal Article
Co-infection patterns in the ectoparasitic community affecting the Iberian ibex Capra pyrenaica
by
Márquez, Francisco J.
,
Castillo-Contreras, Raquel
,
Pérez, Jesús M.
in
adults
,
Animal diseases
,
Animals
2023
Background
Sarcoptic mange is one of the main parasitic diseases affecting the Iberian ibex
Capra pyrenaica
. Scabietic animals suffer a decline in body condition and reproductive fitness and in severe cases may die. Although several previous studies of the pathology of this disease and the physiological changes it produces in ibex have been carried out in recent years, our knowledge of the relationship between
Sarcoptes scabiei
and other ectoparasites of this host is still limited.
Methods
We analysed 430 Iberian ibex skin samples. Ectoparasites were removed, counted and identified. Mite (
S. scabiei
) numbers were obtained after digesting the skin samples in a 5% KOH solution. We modelled mite numbers in terms of host sex and age, site, year, season and the presence of other ectoparasites such as ticks and lice using generalized linear mixed models (GLMMs) and ectoparasite co-occurrence patterns using two different models: the probabilistic model species co-occurrence and the generalized linear latent variable model (GLLVM).
Results
The ectoparasite community was mainly composed of
S. scabiei
, six ticks (
Haemaphysalis sulcata
,
Haemaphysalis punctata
,
Rhipicephalus bursa
,
Rhipicephalus turanicus
,
Dermacentor marginatus
and
Ixodes ricinus
) and two lice (
Bovicola crassipes
and
Linognathus stenopsis
). Adult male ibex harboured more mites than females. Mite numbers varied greatly spatially and seasonally and increased with the presence of other parasites. Some positive co-occurrence relationships between pairs of different ectoparasites were observed, particularly between ticks. The presence of
S. scabiei
negatively affected lice and
H. sulcata
numbers.
Conclusions
Sarcoptic mange has spread above all in ibex populations in and around the Mediterranean Basin, where it is now found in almost a third of its host’s range. Mite numbers varied seasonally and spatially and were higher in male hosts. The presence of
S. scabiei
had a negative effect on lice numbers but favoured the presence of ticks.
Graphical Abstract
Journal Article
Development of resistance to sarcoptic mange in ibex
by
Cano-Manuel, Francisco J.
,
Pérez, Jesús M.
,
Granados, José E.
in
Animal diseases
,
Autoregressive models
,
Capra
2022
Sarcoptic mange affects mammal host species worldwide and, particularly, wild Caprinae throughout much of Eurasia. In the Iberian Peninsula, several outbreaks of sarcoptic mange in Iberian ibex (Capra pyrenaica) have been reported since the 1980s. Using data from a period of long-term monitoring and a seasonal autoregressive integrated moving average (SARIMA)- generalized autoregressive conditional heteroscedasticity (GARCH) model approach, we performed a time-series analysis of the monthly prevalence of sarcoptic mange in the Iberian ibex population in Sierra Nevada Natural Space in southern Spain. In January 2003–March 2021, we documented a significant negative trend in sarcoptic mange prevalence, albeit with some interannual peaks. These findings can only be explained if a certain level of resistance to sarcoptic mange exists in hosts that, along with other factors, could provoke this reduced prevalence. Prevalence values varied seasonally, with maximum values in spring and minimum values at the end of summer, which may be due to factors linked to climate, host behavior, and endocrine activity. Our model predicts that the prevalence of sarcoptic mange in the Iberian ibex will continue to decrease over the next 2 years. Despite the inherent challenges involved, diagnosing and monitoring of wildlife diseases are integral to obtaining reliable epidemiological data and designing appropriate management strategies.
Journal Article
Somatostatin Receptor Splicing Variant sst5TMD4 Overexpression in Glioblastoma Is Associated with Poor Survival, Increased Aggressiveness Features, and Somatostatin Analogs Resistance
by
Pérez-Gómez, Jesús M.
,
Blanco-Acevedo, Cristóbal
,
Luque, Raúl M.
in
Adult
,
Aged
,
Alternative Splicing
2022
Glioblastoma (GBM) is the most malignant and lethal brain tumor. Current standard treatment consists of surgery followed by radiotherapy/chemotherapy; however, this is only a palliative approach with a mean post-operative survival of scarcely ~12–15 months. Thus, the identification of novel therapeutic targets to treat this devastating pathology is urgently needed. In this context, the truncated splicing variant of the somatostatin receptor subtype 5 (sst5TMD4), which is produced by aberrant alternative splicing, has been demonstrated to be overexpressed and associated with increased aggressiveness features in several tumors. However, the presence, functional role, and associated molecular mechanisms of sst5TMD4 in GBM have not been yet explored. Therefore, we performed a comprehensive analysis to characterize the expression and pathophysiological role of sst5TMD4 in human GBM. sst5TMD4 was significantly overexpressed (at mRNA and protein levels) in human GBM tissue compared to non-tumor (control) brain tissue. Remarkably, sst5TMD4 expression was significantly associated with poor overall survival and recurrent tumors in GBM patients. Moreover, in vitro sst5TMD4 overexpression (by specific plasmid) increased, whereas sst5TMD4 silencing (by specific siRNA) decreased, key malignant features (i.e., proliferation and migration capacity) of GBM cells (U-87 MG/U-118 MG models). Furthermore, sst5TMD4 overexpression in GBM cells altered the activity of multiple key signaling pathways associated with tumor aggressiveness/progression (AKT/JAK-STAT/NF-κB/TGF-β), and its silencing sensitized GBM cells to the antitumor effect of pasireotide (a somatostatin analog). Altogether, these results demonstrate that sst5TMD4 is overexpressed and associated with enhanced malignancy features in human GBMs and reveal its potential utility as a novel diagnostic/prognostic biomarker and putative therapeutic target in GBMs.
Journal Article