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11 result(s) for "Tan, Deyun"
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Physiological, biochemical, and transcriptomic alterations in Castor (Ricinus communis L.) under polyethylene glycol-induced oxidative stress
Background Castor is an important industrial raw material. Drought-induced oxidative stress leads to slow growth and decreased yields in castor. However, the mechanisms of drought-induced oxidative stress in castor remain unclear. Therefore, in this study, physiological, biochemical, and RNA-seq analyses were conducted on the roots of castor plants under PEG-6000 stress for 3 d and 7 d followed by 4 d of hydration. Results The photosynthetic rate of castor leaves was inhibited under PEG-6000 stress for 3 and 7 d. Biochemical analysis of castor roots stressed for 3 d and 7 d, and rehydrated for 4 d revealed that the activities of APX and CAT were highest after only 3 d of stress, whereas the activities of POD, GR, and SOD peaked after 7 d of stress. RNA-seq analysis revealed 2926, 1507, and 111 differentially expressed genes (DEGs) in the roots of castor plants under PEG-6000 stress for 3 d and 7 d and after 4 d of rehydration, respectively. GO analysis of the DEGs indicated significant enrichment in antioxidant activity. Furthermore, KEGG enrichment analysis of the DEGs revealed significantly enriched metabolic pathways, including glutathione metabolism, fatty acid metabolism, and plant hormone signal transduction. WGCNA identified the core genes PP2C39 and GA2ox4 in the navajowhite1 module, which was upregulated under PEG-6000 stress. On the basis of these results, we propose a model for the response to drought-induced oxidative stress in castor. Conclusions This study provides valuable antioxidant gene resources, deepening our understanding of antioxidant regulation and paving the way for further molecular breeding of castor plants.
Key defatting tissue pretreatment protocol for enhanced MALDI MS Imaging of peptide biomarkers visualization in the castor beans and their attribution applications
Castor bean or ricin-induced intoxication or terror events have threatened public security and social safety. Potential resources or materials include beans, raw extraction products, crude toxins, and purified ricin. The traceability of the origins of castor beans is thus essential for forensic and anti-terror investigations. As a new imaging technique with label-free, rapid, and high throughput features, matrix-assisted laser desorption ionization mass spectrometry imaging (MALDI-MSI) has been gradually stressed in plant research. However, sample preparation approaches for plant tissues still face severe challenges, especially for some lipid-rich, water-rich, or fragile tissues. Proper tissue washing procedures would be pivotal, but little information is known until now. For castor beans containing plenty of lipids that were fragile when handled, we developed a comprehensive tissue pretreatment protocol. Eight washing procedures aimed at removing lipids were discussed in detail. We then constructed a robust MALDI-MSI method to enhance the detection sensitivity of RCBs in castor beans. A modified six-step washing procedure was chosen as the most critical parameter regarding the MSI visualization of peptides. The method was further applied to visualize and quantify the defense peptides, Ricinus communis biomarkers (RCBs) in castor bean tissue sections from nine different geographic sources from China, Pakistan, and Ethiopia. Multivariate statistical models, including deep learning network, revealed a valuable classification clue concerning nationality and altitude.
Genetic Diversity of Castor Bean (Ricinus communis L.) Revealed by ISSR and RAPD Markers
Castor (Ricinus communis L.), known as castor oil plant or castor bean, is a non-edible oilseed crop. In the present study, the genetic diversity among 54 samples (3 wild and 51 cultivated) collected worldwide was evaluated using inter-simple sequence repeats (ISSRs) and random amplified polymorphic DNA (RAPD) markers. A total of 9 ISSR primers produced 83 high-resolution bands with 61 (74.53%) as polymorphic. The percentage of polymorphic bands per primer and the genetic similarity coefficient ranged from 54.55% (UBC-836) to 100% (UBC-808) and from 0.74 to 0.96, respectively. A total of 11 out of 20 RAPD primers amplified unique polymorphic products with an average percentage of polymorphic bands of 60.98% (56 polymorphic bands out of a total of 90 bands obtained). The percentage of polymorphic bands per primer ranged from 25% (OPA-02 and B7) to 90.91% (B21) with the genetic similarity coefficient ranging from 0.73 to 0.98. The unweighted pair group method with arithmetic averages (UPGMA) dendrogram using two molecular markers divided 54 castor genotypes into three groups. Furthermore, based on morphological data, all 54 castor varieties were grouped into three main clusters. The genetic diversity analysis based on two molecular makers showed that most varieties from China were closely related to each other with three varieties (GUANGDONGwild, ZHEJIANGWild, and HANNANWild) belonging to a wild group separated from most of the cultivated castor samples from China, India, France, and Jordan. These results suggested that the cultivated castor contains a narrow genetic base. Accordingly, we recommend that wild castor genetic resources be introduced for breeding novel castor varieties. Furthermore, the Vietnam, Malaysia, Indonesia, and Nigeria accessions were clustered into the same group. The results of principal coordinate analysis (PCoA) and UPGMA cluster analysis were consistent with each other. The findings of this study are important for future breeding studies of castor.
Comparison of Intentional and Unintentional Injuries Among Chinese Children and Adolescents
Background: The patterns and risk factors of intentional injuries compared to unintentional injuries among Chinese children and adolescents have not been examined in depth. This work comprehensively describes patterns of intentional injuries in China, for which little information has been previously published. Methods: All cases involving individuals 0–17 years old registered at emergency rooms and outpatient clinics were examined using data submitted to the National Injury Surveillance System from 2006 through 2017. A logistic regression model was performed to explore the risk factors related to intentional injuries compared to unintentional injuries. Results: A total of 81,459 (95.1%) unintentional injuries, 4,218 (4.9%) intentional injuries (4,013 violent attacks and 205 self-mutilation/suicide) cases were identified. Blunt injuries accounted for 59.4% of violent attacks, while cuts and poisoning accounted for 37.1% and 23.4% of injuries involving self-mutilation/suicide, respectively. For unintentional injuries, falls (50.4%) ranked first. Additional risk factors for intentional injuries included being male (odds ratio [OR] 1.6), coming from rural areas (OR 1.9), being staff or workers (OR 2.2), and being a student (OR 1.8). As the age of the patients increased, so did the risk of intentional injuries (OR 5.0 in the 15–17 age group). Intentional injuries were more likely to occur at 00:00–03:00 am (OR 2.0). Conclusions: Intentional injuries affected more males, rural and older children, school students, and staff or workers. The mechanisms and occurrence times differed according to age group. Preventive measures should be taken to reduce the dropout of rural students, strengthen the school’s violence prevention plan, and reduce self-harm.
A Fluorine-Functionalized Tb(III)–Organic Framework for Ba2+ Detection
The development of lanthanide–organic frameworks (Ln-MOFs) using for luminescence sensing and selective gas adsorption applications is of great significance from an energy and environmental perspective. This study reports the solvothermal synthesis of a fluorine-functionalized 3D microporous Tb-MOF with a face-centered cubic (fcu) topology constructed from hexanuclear clusters (Tb6O30) bridged by fdpdc ligands, formulated as [Tb6(fdpdc)6(μ3-OH)8(H2O)6]·4DMFn (1), (fdpdc = 3-fluorobiphenyl-4,4′-dicarboxylate). Complex 1 displays a 3D framework with the channel of 7.2 × 7.2 Å2 (measured between opposite atoms) perpendicular to the a-axis. With respect to Ba2+ cation, the framework of activated 1 (1a) exhibits high selectivity and reversibility in luminescence sensing function, with an LOD of 4.34665 mM. According to the results of simulations, compared to other small gas molecules (CO2, N2, H2, CO, and CH4), activated 1 (1a) shows a high adsorption selectivity for C2H2 at 298 K.
A Fluorine-Functionalized Tb–Organic Framework for Basup.2+ Detection
The development of lanthanide–organic frameworks (Ln-MOFs) using for luminescence sensing and selective gas adsorption applications is of great significance from an energy and environmental perspective. This study reports the solvothermal synthesis of a fluorine-functionalized 3D microporous Tb-MOF with a face-centered cubic (fcu) topology constructed from hexanuclear clusters (Tb[sub.6]O[sub.30]) bridged by fdpdc ligands, formulated as [Tb[sub.6](fdpdc)[sub.6](μ [sub.3]-OH)[sub.8](H[sub.2]O)[sub.6]]·4DMF[sub.n] (1), (fdpdc = 3-fluorobiphenyl-4,4′-dicarboxylate). Complex 1 displays a 3D framework with the channel of 7.2 × 7.2 Å[sup.2] (measured between opposite atoms) perpendicular to the a-axis. With respect to Ba[sup.2+] cation, the framework of activated 1 (1a) exhibits high selectivity and reversibility in luminescence sensing function, with an LOD of 4.34665 mM. According to the results of simulations, compared to other small gas molecules (CO[sub.2], N[sub.2], H[sub.2], CO, and CH[sub.4]), activated 1 (1a) shows a high adsorption selectivity for C[sub.2]H[sub.2] at 298 K.
Variational Mode Decomposition Weighted Multiscale Support Vector Regression for Spectral Determination of Rapeseed Oil and Rhizoma Alpiniae Offcinarum Adulterants
The accurate prediction of the model is essential for food and herb analysis. In order to exploit the abundance of information embedded in the frequency and time domains, a weighted multiscale support vector regression (SVR) method based on variational mode decomposition (VMD), namely VMD-WMSVR, was proposed for the ultraviolet-visible (UV-Vis) spectral determination of rapeseed oil adulterants and near-infrared (NIR) spectral quantification of rhizoma alpiniae offcinarum adulterants. In this method, each spectrum is decomposed into K discrete mode components by VMD first. The mode matrix Uk is recombined from the decomposed components, and then, the SVR is used to build sub-models between each Uk and target value. The final prediction is obtained by integrating the predictions of the sub-models by weighted average. The performance of the proposed method was tested with two spectral datasets of adulterated vegetable oils and herbs. Compared with the results from partial least squares (PLS) and SVR, VMD-WMSVR shows potential in model accuracy.
Transport of surface-modified multi-walled carbon nanotubes in saturated porous media
Carbon nanotubes (CNTs) are widely used and may pose potential environmental risks to soil and groundwater systems. Therefore, it is important to improve current understanding of the fate and transport of CNTs in porous media. In this study, the transport behavior of multi-walled carbon nanotubes (MWCNTs) with different surface modifications were examined in water-saturated sand columns under different pH (5 and 7) and ionic strength (0.1, 1, and 5 mM) conditions. COOH-MWCNTs have the strongest mobility among the five types of MWCNTs, followed by pristine MWCNTs. NH 2 -MWCNTs, Cu-MWCNTs, and Fe-MWCNTs have the weaker mobility. The transport of five types of MWCNTs decreased with the increase of ionic strength, while increased with the increase of pH value. The results suggested that the transport of MWCNTs can be affected by the electrostatic attraction between the functional groups on the surface of MWCNTs and quartz sand. Moreover, the pH and ionic strength of the solution also played an important role in enhancing the transport of MWCNTs, which have great significance for evaluating the transport and fate of MWCNTs in natural environment.
Therapeutic Evaluation of Epstein-Barr Virus-encoded Latent Membrane Protein-1 Targeted DNAzyme for Treating of Nasopharyngeal Carcinomas
The ability of the 10–23 DNAzyme to specifically cleave RNA with high efficiency has fuelled expectation that this agent may have useful applications for targeted therapy. Here, we, for the first time, investigated the antitumor and radiosensitizing effects of a DNAzyme (DZ1) targeted to the Epstein-Barr virus (EBV)-LMP1 mRNA of nasopharyngeal carcinoma (NPC) in patients. Preclinical studies indicated that the DNAzyme was safe and well tolerated. A randomized and double-blind clinical study was conducted in 40 NPC patients who received DZ1 or saline intratumorally, in conjunction with radiation therapy. Tumor regression, patient survival, EBV DNA copy number and tumor microvascular permeability were assessed in a 3-month follow-up. The mean tumor regression rate at week 12 was significantly higher in DZ1 treated group than in the saline control group. Molecular imaging analysis showed that DZ1 impacted on tumor microvascular permeability as evidenced by a faster decline of the Ktrans in DZ1-treated patients. The percentage of the samples with undetectable level of EBV DNA copy in the DZ1 group was significantly higher than that in the control group. No adverse events that could be attributed to the DZ1 injection were observed in patients.
A Fluorine-Functionalized Tb(III)-Organic Framework for Ba 2+ Detection
The development of lanthanide-organic frameworks (Ln-MOFs) using for luminescence sensing and selective gas adsorption applications is of great significance from an energy and environmental perspective. This study reports the solvothermal synthesis of a fluorine-functionalized 3D microporous Tb-MOF with a face-centered cubic ( ) topology constructed from hexanuclear clusters (Tb O ) bridged by fdpdc ligands, formulated as {[Tb (fdpdc) ( -OH) (H O) ]·4DMF} ( ), (fdpdc = 3-fluorobiphenyl-4,4'-dicarboxylate). Complex displays a 3D framework with the channel of 7.2 × 7.2 Å (measured between opposite atoms) perpendicular to the -axis. With respect to Ba cation, the framework of activated ( ) exhibits high selectivity and reversibility in luminescence sensing function, with an LOD of 4.34665 mM. According to the results of simulations, compared to other small gas molecules (CO , N , H , CO, and CH ), activated ( ) shows a high adsorption selectivity for C H at 298 K.