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result(s) for
"Wang, Xiaoyue"
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A stretchable, mechanically robust polymer exhibiting shape-memory-assisted self-healing and clustering-triggered emission
2023
Self-healing and recyclable polymer materials are being developed through extensive investigations on noncovalent bond interactions. However, they typically exhibit inferior mechanical properties. Therefore, the present study is aimed at synthesizing a polyurethane–urea elastomer with excellent mechanical properties and shape-memory-assisted self-healing behavior. In particular, the introduction of coordination and hydrogen bonds into elastomer leads to the optimal elastomer exhibiting good mechanical properties (strength, 76.37 MPa; elongation at break, 839.10%; toughness, 308.63 MJ m
−3
) owing to the phased energy dissipation mechanism involving various supramolecular interactions. The elastomer also demonstrates shape-memory properties, whereby the shape recovery force that brings damaged surfaces closer and facilitates self-healing. Surprisingly, all specimens exhibite clustering-triggered emission, with cyan fluorescence is observed under ultraviolet light. The strategy reported herein for developing multifunctional materials with good mechanical properties can be leveraged to yield stimulus-responsive polymers and smart seals.
Polymers formed with non-covalent bonds are increasingly being developed, but often show inferior mechanical properties. Here, the authors report the development of high performances polyurethane-urea elastomer with shape-memory assisted self-healing behaviour
Journal Article
Disentangling the Effects of Atmospheric and Soil Dryness on Autumn Phenology across the Northern Hemisphere
by
Dong, Kangbo
,
Wang, Xiaoyue
in
Agricultural production
,
Artificial satellites in remote sensing
,
Atmospheric water
2024
In recent decades, drought has intensified along with continuous global warming, significantly impacting terrestrial vegetation. High atmospheric water demand, indicated by vapor pressure deficit (VPD), and insufficient soil moisture (SM) are considered the primary factors causing drought stress in vegetation. However, the influences of VPD and SM on the autumn phenology are still unknown. Using satellite observations and meteorological data, we examined the impacts of VPD and SM on the end of the growing season (EOS) across the Northern Hemisphere (>30°N) from 1982 to 2022. We found that VPD and SM were as important as temperature, precipitation, and radiation in controlling the variations in the EOS. Moreover, the EOS was predominantly influenced by VPD or SM in more than one-third (33.8%) of the study area. In particular, a ridge regression analysis indicated that the EOS was more sensitive to VPD than to SM and the other climatic factors, with 25% of the pixels showing the highest sensitivity to VPD. In addition, the effects of VPD and SM on the EOS varied among biome types and climate zones. VPD significantly advanced the EOS in 25.8% of temperate grasslands, while SM had the greatest impact on advancing the EOS in 17.7% of temperate coniferous forests. Additionally, 27.7% of the midlatitude steppe (BSk) exhibited a significant negative correlation between VPD and the EOS, while 19.4% of the marine west coast climate (Cfb) showed a positive correlation between SM and the EOS. We also demonstrated that the correlation between VPD and the EOS was linearly affected by VPD and the leaf area index, while the correlation between SM and the EOS was affected by SM, precipitation, and the leaf area index. Our study highlights the importance of VPD and SM in regulating autumn phenology and enhances our understanding of terrestrial ecosystem responses to climate change.
Journal Article
DNA Mini-Barcoding: A Derived Barcoding Method for Herbal Molecular Identification
2019
In recent years, the demand for natural herbal products (NHP) has increased; however, the quality of these products is difficult to confirm due to the lack of a comprehensive quality control system. Traditional methods are not effective in detecting processed ingredients. DNA barcoding is an established technique that has been used for more than 10 years. This technique uses short standard sequences (generally 200–600 bp) to identify species. While a complete DNA barcode is difficult to obtain from NHP due to DNA degradation, mini-barcoding is a complementary tool to identify species in NHP. DNA mini-barcoding uses smaller DNA segments for polymerase chain reaction amplification and can be applied to identify species rapidly. The present review summarizes the development and application of DNA mini-barcodes over recent years and discusses the limitations of this technique. This review also compares mini-barcoding and meta-barcoding, a technique using universal polymerase chain reaction primers to simultaneously amplify multiple DNA barcodes and identify many species in a single environmental sample. Additionally, other detection methods that can be combined with mini-barcodes, such as nucleotide signatures, high-resolution DNA melting analysis, and gold nanoparticles, are discussed. DNA mini-barcoding can fill the gaps left by other methods in the field of herbal molecular identification.
Journal Article
Identification of pathogenic variants in cancer genes using base editing screens with editing efficiency correction
by
Wu, Jiayu
,
Liang, Junbo
,
Huang, Changcai
in
5' Untranslated regions
,
Algorithms
,
Animal Genetics and Genomics
2021
Background
Millions of nucleotide variants are identified through cancer genome sequencing and it is clinically important to identify the pathogenic variants among them. By introducing base substitutions at guide RNA target regions in the genome, CRISPR-Cas9-based base editors provide the possibility for evaluating a large number of variants in their genomic context. However, the variability in editing efficiency and the complexity of outcome mapping are two existing problems for assigning guide RNA effects to variants in base editing screens.
Results
To improve the identification of pathogenic variants, we develop a framework to combine base editing screens with sgRNA efficiency and outcome mapping. We apply the method to evaluate more than 9000 variants across all the exons of
BRCA1
and
BRCA2
genes. Our efficiency-corrected scoring model identifies 910 loss-of-function variants for
BRCA1/2
, including 151 variants in the noncoding part of the genes such as the 5′ untranslated regions. Many of them are identified in cancer patients and are reported as “benign/likely benign” or “variants of uncertain significance” by clinicians. Our data suggest a need to re-evaluate their clinical significance, which may be helpful for risk assessment and treatment of breast and ovarian cancer.
Conclusions
Our results suggest that base editing screens with efficiency correction is a powerful strategy to identify pathogenic variants in a high-throughput manner. Applying this strategy to assess variants in both coding and noncoding regions of the genome could have a direct impact on the interpretation of cancer variants.
Journal Article
Root ethylene mediates rhizosphere microbial community reconstruction when chemically detecting cyanide produced by neighbouring plants
2020
Background
Stress-induced hormones are essential for plants to modulate their microbiota and dynamically adjust to the environment. Despite the emphasis of the role of the phytohormone ethylene in the plant physiological response to heterospecific neighbour detection, less is known about how this activated signal mediates focal plant rhizosphere microbiota to enhance plant fitness. Here, using 3 years of peanut (
Arachis hypogaea
L.), a legume, and cyanide-containing cassava (
Manihot esculenta
Crantz) intercropping and peanut monocropping field, pot and hydroponic experiments in addition to exogenous ethylene application and soil incubation experiments, we found that ethylene, a cyanide-derived signal, is associated with the chemical identification of neighbouring cassava and the microbial re-assemblage in the peanut rhizosphere.
Results
Ethylene production in peanut roots can be triggered by cyanide production of neighbouring cassava plants. This gaseous signal alters the microbial composition and re-assembles the microbial co-occurrence network of peanut by shifting the abundance of an actinobacterial species,
Catenulispora
sp., which becomes a keystone in the intercropped peanut rhizosphere. The re-assembled rhizosphere microbiota provide more available nutrients to peanut roots and support seed production.
Conclusions
Our findings suggest that root ethylene acts as a signal with a dual role. It plays a role in perceiving biochemical cues from interspecific neighbours, and also has a regulatory function in mediating the rhizosphere microbial assembly, thereby enhancing focal plant fitness by improving seed production. This discovery provides a promising direction to develop novel intercropping strategies for targeted manipulations of the rhizosphere microbiome through phytohormone signals.
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Journal Article
Atomic scale chemical tomography of human bone
2017
Human bone is a complex hierarchical material. Understanding bone structure and its corresponding composition at the nanometer scale is critical for elucidating mechanisms of biomineralization under healthy and pathological states. However, the three-dimensional structure and chemical nature of bone remains largely unexplored at the nanometer scale due to the challenges associated with characterizing both the structural and chemical integrity of bone simultaneously. Here, we use correlative transmission electron microscopy and atom probe tomography for the first time, to our knowledge, to reveal structures in human bone at the atomic level. This approach provides an overlaying chemical map of the organic and inorganic constituents of bone on its structure. This first use of atom probe tomography on human bone reveals local gradients, trace element detection of Mg, and the co-localization of Na with the inorganic-organic interface of bone mineral and collagen fibrils, suggesting the important role of Na-rich organics in the structural connection between mineral and collagen. Our findings provide the first insights into the hierarchical organization and chemical heterogeneity in human bone in three-dimensions at its smallest length scale – the atomic level. We demonstrate that atom probe tomography shows potential for new insights in biomineralization research on bone.
Journal Article
Detection of early-stage hepatocellular carcinoma in asymptomatic HBsAg-seropositive individuals by liquid biopsy
by
Yan, Hai
,
Lu, Jianquan
,
Zhao, Hui
in
Assaying
,
Biological Sciences
,
Biomarkers, Tumor - blood
2019
Liquid biopsies, based on cell free DNA (cfDNA) and proteins, have shown the potential to detect early stage cancers of diverse tissue types. However, most of these studies were retrospective, using individuals previously diagnosed with cancer as cases and healthy individuals as controls. Here, we developed a liquid biopsy assay, named the hepatocellular carcinoma screen (HCCscreen), to identify HCC from the surface antigen of hepatitis B virus (HBsAg) positive asymptomatic individuals in the community population. The training cohort consisted of individuals who had liver nodules and/or elevated serum α-fetoprotein (AFP) levels, and the assay robustly separated those with HCC from those who were non-HCC with a sensitivity of 85% and a specificity of 93%. We further applied this assay to 331 individuals with normal liver ultrasonography and serum AFP levels. A total of 24 positive cases were identified, and a clinical follow-up for 6–8 mo confirmed four had developed HCC. No HCC cases were diagnosed from the 307 test-negative individuals in the follow-up during the same time-scale. Thus, the assay showed 100% sensitivity, 94% specificity, and 17% positive predictive value in the validation cohort. Notably, each of the four HCC cases was at the early stage (<3 cm) when diagnosed. Our study provides evidence that the use of combined detection of cfDNA alterations and protein markers is a feasible approach to identify early stage HCC from asymptomatic community populations with unknown HCC status.
Journal Article
Large-scale forest conservation and restoration programs significantly contributed to land surface greening in China
2022
China has implemented a portfolio of large-scale forest conservation and restoration programs (FCRPs) to advance the sustainable management of forests. However, the contributions of these programs to forest recovery and land surface greening were generally evaluated on a local scale, which hindered the systematic planning of FCRPs. In this study, we analyzed the spatiotemporal patterns of tree cover (TC) change before and after the intensification of FCRPs using the Mann-Kendall test and the Theil–Sen slope estimator. With the improved phenology-based residual trend analysis (P-RESTREND) method, we derived the spatiotemporal patterns of human-induced tree cover (TC H ) change on the national scale. Then, we calculated the effectiveness index of FCRPs at the provincial level, based on which the effectiveness levels for the 31 provinces of mainland China were classified. Our study showed that the area of forested lands with a significant greening trend was almost five times larger in the post-intensification phase (1999–2015) than in the pre-intensification phase of FCRPs (1982–1998). More than 29.9% of the forested lands were significantly improved in TC by human activities in the post-intensification phase. Provinces with high effectiveness levels were generally distributed in humid areas, whereas the majority of provinces with low and moderately low effectiveness levels were spread in arid and semi-arid regions. We concluded that the implementation of FCRPs had contributed greatly to the land surface greening in China. Moreover, the effectiveness of FCRPs in forest recovery was heterogeneous at the provincial level and was driven by multiple natural and socioeconomic factors.
Journal Article
Study of the characteristics of pollutants in rural domestic sewage and the optimal sewage treatment process: a Chengdu Plain case study
by
Chao, Liqiang
,
Wan, Yanlei
,
Chen, Xuefeng
in
Ammonia
,
Biochemical oxygen demand
,
Biological Oxygen Demand Analysis
2023
Domestic sewage is an important source of surface water pollution in the rural areas of developing countries, especially in the rural areas of China. In recent years, with the strategy of rural revitalization, China has paid increasing attention to the treatment of rural domestic sewage. Therefore, 16 villages in the Chengdu Plain were selected for the study, and seven indicators were analyzed and evaluated, including pH, five-day biochemical oxygen demand (BOD5), chemical oxygen demand (COD), ammonia nitrogen (NH3-N), total phosphorus (TP), suspended solids (SS) and total nitrogen (TN), in the water samples at the inlet and outlet of the wastewater treatment plant. The concentration of each pollutant in the rural scattered domestic sewage of the Chengdu Plain in Southwest China was obtained, and the concentration of each pollutant in domestic sewage was higher than that in summer. In addition, the preferred process for removing each pollutant was obtained by studying the effects of the treatment process, season and hydraulic retention time on the removal efficiency of each pollutant. The research results provide valuable references for the planning and process selection of rural domestic sewage treatment.
Journal Article