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Estimation of forest aboveground biomass (AGB) is crucial for various technical and scientific applications, ranging from regional carbon and bioenergy policies to sustainable forest management. However, passive optical remote sensing, which is the most widely used remote sensing data for retrieving vegetation parameters, is constrained by spectral saturation problems and cloud cover. On the other hand, LiDAR data, which have been extensively used to estimate forest structure attributes, cannot provide sufficient spectral information of vegetation canopies. Thus, this study aimed to develop a novel synergistic approach to estimating biomass by integrating LiDAR data with Landsat 8 imagery through a deep learning-based workflow. First the relationships between biomass and spectral vegetation indices (SVIs) and LiDAR metrics were separately investigated. Next, two groups of combined optical and LiDAR indices (i.e., COLI1 and COLI2) were designed and explored to identify their performances in biomass estimation. Finally, five prediction models, including K-nearest Neighbor, Random Forest, Support Vector Regression, the deep learning model, i.e., Stacked Sparse Autoencoder network (SSAE), and multiple stepwise linear regressions, were individually used to estimate biomass with input variables of different scenarios, i.e., (i) all the COLI1 (ACOLI1), (ii) all the COLI2 (ACOLI2), (iii) ACOLI1 and all the optical (AO) and LiDAR variables (AL), and (iv) ACOLI2, AO and AL. Results showed that univariate models with the combined optical and LiDAR indices as explanatory variables presented better modeling performance than those with either optical or LiDAR data alone, regardless of the combination mode. The SSAE model obtained the best performance compared to the other tested prediction algorithms for the forest biomass estimation. The best predictive accuracy was achieved by the SSAE model with inputs of combined optical and LiDAR variables (i.e., ACOLI1, AO and AL) that yielded an R2 of 0.935, root mean squared error (RMSE) of 15.67 Mg/ha, and relative root mean squared error (RMSEr) of 11.407%. It was concluded that the presented combined indices were simple and effective by integrating LiDAR-derived structure information with Landsat 8 spectral data for estimating forest biomass. Overall, the SSAE model with inputs of Landsat 8 and LiDAR integrated information resulted in accurate estimation of forest biomass. The presented modeling workflow will greatly facilitate future forest biomass estimation and carbon stock assessments.

Spatially and temporally explicit information on the biomass in terrestrial ecosystems is essential to better understand the carbon cycle and achieve vegetation resource conservation. As a climate-sensitive critical ecological function area, accurate monitoring of the spatiotemporal variation in the grassland aboveground biomass (AGB) is important in the Three-River Headwater Region (TRHR) of China. In this study, based on field observation, remote sensing, meteorological and topographical data, we estimated the grassland AGB in the TRHR and analyzed its spatiotemporal change and response to climatic factors. Four machine learning (ML) models (random forest (RF), cubist, artificial neural network and support vector machine models) were constructed and compared for AGB simulation purposes. The AGB results estimated with the four ML models were then applied in integrated analysis via Bayesian model averaging (BMA) to obtain more accurate and stable estimates. Our results demonstrated that the RF model performed better among the four ML models (testing dataset: correlation coefficient (r) = 0.84; root mean squared error = 76.99 g m−2), and BMA improved grassland AGB prediction based on the multimodel results. The spatial distribution of the grassland AGB in the TRHR was heterogeneous, with higher values in the southeast and lower values in the northwest. The interannual variation in the grassland AGB in most areas of the TRHR exhibited nonsignificant increasing trends from 2000 to 2018, and the sensitivity of the AGB to the annual precipitation was obviously modulated by regional water conditions. This study provides a more precise method for grassland AGB estimation, and these findings are expected to enable improved assessments to obtain a greater grassland AGB understanding.

Above ground biomass (AGB) is a parameter commonly used for assessment of grassland systems. Destructive AGB measurements, although accurate, are time consuming and are not easily undertaken on a repeat basis or over large areas. Structure-from-Motion (SfM) photogrammetry and Terrestrial Laser Scanning (TLS) are two technologies that have the potential to yield precise 3D structural measurements of vegetation quite rapidly. Recent advances have led to the successful application of TLS and SfM in woody biomass estimation, but application in natural grassland systems remains largely untested. The potential of these techniques for AGB estimation is examined considering 11 grass plots with a range of biomass in South Dakota, USA. Volume metrics extracted from the TLS and SfM 3D point clouds, and also conventional disc pasture meter settling heights, were compared to destructively harvested AGB total (grass and litter) and AGB grass plot measurements. Although the disc pasture meter was the most rapid method, it was less effective in AGB estimation (AGBgrass r2 = 0.42, AGBtotal r2 = 0.32) than the TLS (AGBgrass r2 = 0.46, AGBtotal r2 = 0.57) or SfM (AGBgrass r2 = 0.54, AGBtotal r2 = 0.72) which both demonstrated their utility for rapid AGB estimation of grass systems.

Aboveground biomass (AGB) is a crucial physiological parameter for monitoring crop growth, assessing nutrient status, and predicting yield. Texture features (TFs) derived from remote sensing images have been proven to be crucial for estimating crops AGB, which can effectively address the issue of low accuracy in AGB estimation solely based on spectral information. TFs exhibit sensitivity to the size of the moving window and directional parameters, resulting in a substantial impact on AGB estimation. However, few studies systematically assessed the effects of moving window and directional parameters for TFs extraction on rice AGB estimation. To this end, this study used Unmanned aerial vehicles (UAVs) to acquire multispectral imagery during crucial growth stages of rice and evaluated the performance of TFs derived with different grey level co-occurrence matrix (GLCM) parameters by random forest (RF) regression model. Meanwhile, we analyzed the importance of TFs under the optimal parameter settings. The results indicated that: (1) the appropriate window size for extracting TFs varies with the growth stages of rice plant, wherein a small-scale window demonstrates advantages during the early growth stages, while the opposite holds during the later growth stages; (2) TFs derived from 45° direction represent the optimal choice for estimating rice AGB. During the four crucial growth stages, this selection improved performance in AGB estimation with R 2 = 0.76 to 0.83 and rRMSE = 13.62% to 21.33%. Furthermore, the estimation accuracy for the entire growth season is R 2 =0.84 and rRMSE =21.07%. However, there is no consensus regarding the selection of the worst TFs computation direction; (3) Correlation (Cor), Mean, and Homogeneity (Hom) from the first principal component image reflecting internal information of rice plant and Contrast (Con), Dissimilarity (Dis), and Second Moment (SM) from the second principal component image expressing edge texture are more important to estimate rice AGB among the whole growth stages; and (4) Considering the optimal parameters, the accuracy of texture-based AGB estimation slightly outperforms the estimation accuracy based on spectral reflectance alone. In summary, the present study can help researchers confident use of GLCM-based TFs to enhance the estimation accuracy of physiological and biochemical parameters of crops.

The estimation of characteristic parameters such as diameter at breast height (DBH), aboveground biomass (AGB) and stem volume (V) is an important part of urban forest resource monitoring and the most direct manifestation of the ecosystem functions of forests; therefore, the accurate estimation of urban forest characteristic parameters is valuable for evaluating urban ecological functions. In this study, the height and density characteristic variables of canopy point clouds were extracted as Scheme 1 and combined with the canopy structure variables as Scheme 2 based on unmanned aerial vehicle lidar (UAV-Lidar). We analyzed the spatial distribution characteristics of the canopies of different tree species, and multiple linear regression (MLR), support vector regression (SVR), and random forest (RF) models were used to estimate the DBH, AGB, and V of urban single trees. The estimation accuracy of different models was evaluated based on the field-measured data. The results indicated that the model accuracy of coupling canopy structure variables (R2 = 0.69–0.85, rRMSE = 9.87–24.67%) was higher than that of using only point-cloud-based height and density characteristic variables. The comparison of the results of different models shows that the RF model had the highest estimation accuracy (R2 = 0.76–0.85, rRMSE = 9.87–22.51%), which was better than that of the SVR and MLR models. In the RF model, the estimation accuracy of AGB was the highest (R2 = 0.85, rRMSE = 22.51%), followed by V, with an accuracy of R2 = 0.83, rRMSE = 18.51%, and the accuracy of DBH was the lowest (R2 = 0.76, rRMSE = 9.87%). The results of the study provide an important reference for the estimation of single-tree characteristic parameters in urban forests based on UAV-Lidar.

Forest biomass is critically important for forest dynamics in the carbon cycle. However, large-scale AGB mapping applications from remote sensing data still carry large uncertainty. In this study, an AGB estimation model was first established with three different remote sensing datasets of GF-2, Sentinel-2 and Landsat-8. Next, the optimal scale estimation result was considered as a reference AGB to obtain the relative true AGB distribution at different scales based on the law of conservation of mass, and the error of the scale effect of AGB estimation at various spatial resolutions was analyzed. Then, the information entropy of land use type was calculated to identify the heterogeneity of pixels. Finally, a scale conversion method for the entropy-weighted index was developed to correct the scale error of the estimated AGB results from coarse-resolution remote sensing images. The results showed that the random forest model had better prediction accuracy for GF-2 (4 m), Sentinel-2 (10 m) and Landsat-8 (30 m) AGB mapping. The determination coefficient between predicted and measured AGB was 0.5711, 0.4819 and 0.4321, respectively. Compared to uncorrected AGB, R2 between scale-corrected results and relative true AGB increased from 0.6226 to 0.6725 for Sentinel-2, and increased from 0.5910 to 0.6704 for Landsat-8. The scale error was effectively corrected. This study can provide a reference for forest AGB estimation and scale error reduction for AGB production upscaling with consideration of the spatial heterogeneity of the forest surface.

[This corrects the article DOI: 10.3389/fpls.2023.1284235.].

In tree Aboveground Biomass (AGB) estimation, the traditional harvest method is accurate but unsuitable for a large-scale forest. The airborne Light Detection And Ranging (LiDAR) is superior in obtaining the point cloud data of a dense forest and extracting tree heights for AGB estimation. However, the LiDAR has limitations such as high cost, low efficiency, and complicated operations. Alternatively, the overlapping oblique photographs taken by an Unmanned Aerial Vehicle (UAV)-loaded digital camera can also generate point cloud data using the Aerial Triangulation (AT) method. However, limited by the relatively poor penetrating capacity of natural light, the photographs captured by the digital camera on a UAV are more suitable for obtaining the point cloud data of a relatively sparse forest. In this paper, an electric fixed-wing UAV loaded with a digital camera was employed to take oblique photographs of a sparse subalpine coniferous forest in the source region of the Minjiang River. Based on point cloud data obtained from the overlapping photographs, a Digital Terrain Model (DTM) was generated by filtering non-ground points along with the acquisition of a Digital Surface Model (DSM) of Minjiang fir trees by eliminating subalpine shrubs and meadows. Individual tree heights were extracted by overlaying individual tree outlines on Canopy Height Model (CHM) data computed by subtracting the Digital Elevation Model (DEM) from the rasterized DSM. The allometric equation with tree height (H) as the predictor variable was established by fitting measured tree heights with tree AGBs, which were estimated using the allometric equation on H and Diameter at Breast Height (DBH) in sample tree plots. Finally, the AGBs of all of the trees in the test site were determined by inputting extracted individual tree heights into the established allometric equation. In accuracy assessment, the coefficient of determination (R2) and Root Mean Square Error (RMSE) of extracted individual tree heights were 0.92 and 1.77 m, and the R2 and RMSE of the estimated AGBs of individual trees were 0.96 and 54.90 kg. The results demonstrated the feasibility and effectiveness of applying UAV-acquired oblique optical photographs to the tree AGB estimation of sparse subalpine coniferous forests.

Accurately estimating forest aboveground biomass (AGB) is imperative for comprehending carbon cycling, calculating carbon budgets, and formulating sustainable forest management plans. Currently, random forest (RF) and other machine learning models are widely used to estimate forest AGB, as they can effectively handle nonlinear relationships. However, by constructing a global model using all the samples collected from a study area, these models fail to account for the spatial heterogeneity in the AGB and cannot correct the prediction biases, thereby constraining the estimation accuracy. To overcome these limitations, we proposed a novel approach termed geographical random forest and empirical Bayesian kriging (GRFEBK). This hybrid model combines the localized modeling capability of geographical random forest (GRF) with the bias correction strength of empirical Bayesian kriging (EBK). GRF adapts RF to account for the spatial heterogeneity of the AGB, while EBK utilizes the spatial autocorrelation of residuals to correct the prediction deviations. This study was conducted in Hainan Island, utilizing spectral bands, vegetation indices, tasseled cap components derived from Landsat-8 imagery, backscattering coefficients from ALOS-2 synthetic aperture radar, topographic features, and the forest canopy height as the explanatory variables. A total of 195 forest aboveground biomass (AGB) samples were collected for modeling and assessing the predictive accuracy. The results demonstrate that, among the tested models, including GRFEBK, RF, support vector machine (SVM), k-nearest neighbor (KNN), geographically weighted regression (GWR), GRF, and EBK, GRFEBK attains the highest R2 (0.78) and the lowest RMSE (36.04 Mg/ha) and RRMSE (22.87%), significantly outperforming the conventional models and using GRF or EBK alone. These results demonstrate that by accounting for local non-stationarity in AGB and correcting prediction biases, GRFEBK achieves significantly higher accuracy than conventional RF and other models. While the results are promising, the computational cost of GRFEBK and its performance under varying geographical conditions warrant further investigation at larger scales to assess its broader applicability. Nevertheless, GRFEBK provides an innovative and more reliable approach for accurate forest AGB estimation with great potential to support global forest resource monitoring.

Individual tree crown (ITC) segmentation is an approach to isolate individual tree from the background vegetation and delineate precisely the crown boundaries for forest management and inventory purposes. ITC detection and delineation have been commonly generated from canopy height model (CHM) derived from light detection and ranging (LiDAR) data. Existing ITC segmentation methods, however, are limited in their efficiency for characterizing closed canopies, especially in tropical forests, due to the overlapping structure and irregular shape of tree crowns. Furthermore, the potential of 3-dimensional (3D) LiDAR data is not fully realized by existing CHM-based methods. Thus, the aim of this study was to develop an efficient framework for ITC segmentation in tropical forests using LiDAR-derived CHM and 3D point cloud data in order to accurately estimate tree attributes such as the tree height, mean crown width and aboveground biomass (AGB). The proposed framework entails five major steps: (1) automatically identifying dominant tree crowns by implementing semi-variogram statistics and morphological analysis; (2) generating initial tree segments using a watershed algorithm based on mathematical morphology; (3) identifying “problematic” segments based on predetermined set of rules; (4) tuning the problematic segments using a modified distance-based algorithm (DBA); and (5) segmenting and counting the number of individual trees based on the 3D LiDAR point clouds within each of the identified segment. This approach was developed in a way such that the 3D LiDAR points were only examined on problematic segments identified for further evaluations. 209 reference trees with diameter at breast height (DBH) ≥ 10 cm were selected in the field in two study areas in order to validate ITC detection and delineation results of the proposed framework. We computed tree crown metrics (e.g., maximum crown height and mean crown width) to estimate aboveground biomass (AGB) at tree level using previously published allometric equations. Accuracy assessment was performed to calculate percentage of correctly detected trees, omission and commission errors. Our method correctly identified individual tree crowns with detection accuracy exceeding 80 percent at both forest sites. Also, our results showed high agreement (R2 > 0.64) in terms of AGB estimates using 3D LiDAR metrics and variables measured in the field, for both sites. The findings from our study demonstrate the efficacy of the proposed framework in delineating tree crowns, even in high canopy density areas such as tropical rainforests, where, usually the traditional algorithms are limited in their performances. Moreover, the high tree delineation accuracy in the two study areas emphasizes the potential robustness and transferability of our approach to other densely forested areas across the globe.