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The Santa Rosa fossil locality in eastern Perú produced the first Paleogene vertebrate fauna from the Amazon Basin, including the oldest known monkeys from South America. This diverse paleofauna was originally assigned an Eocene age based largely on the stage of evolution of the site’s caviomorph rodents and marsupials. Here, we present detrital zircon dates that indicate that the maximum composite age of Santa Rosa is 29.6 ± 0.08 Ma (Lower Oligocene), although several zircons from Santa Rosa date to the Upper Oligocene. The first appearance datum for Caviomorpha in South America is purported to be the CTA-27 site in the Contamana region of Perú, which is hypothesized to be ∼41 Ma (Middle Eocene) in age. However, the presence of the same caviomorph species and/or genera at both CTA-27 and at Santa Rosa is now difficult to reconcile with a >11-My age difference. To further test the Middle Eocene age estimate for CTA-27, we ran multiple Bayesian tip-dating analyses of Caviomorpha, treating the ages of all Paleogene species from Perú as unknown. These analyses produced mean age estimates for Santa Rosa that closely approximate the maximum 29.6 ± 0.08 Ma composite date provided by detrital zircons, but predict that CTA-27 is much younger than currently thought (∼30 Ma). We conclude that the ∼41 Ma age proposed for CTA-27 is incorrect, and that there are currently no compelling Eocene records of either rodents or primates in the known fossil record of South America.

BACKGROUND: Development of phylogenetic methods that do not rely on fossils for the study of evolutionary processes through time have revolutionized the field of evolutionary biology and resulted in an unprecedented expansion of our knowledge about the tree of life. These methods have helped to shed light on the macroevolution of many taxonomic groups such as the placentals (Mammalia). However, despite the increase of studies addressing the diversification patterns of organisms, no synthesis has addressed the case of the most diversified mammalian clade: the Rodentia. RESULTS: Here we present a rodent maximum likelihood phylogeny inferred from a molecular supermatrix. It is based on 11 mitochondrial and nuclear genes that covers 1,265 species, i.e., respectively 56% and 81% of the known specific and generic rodent diversity. The inferred topology recovered all Rodentia clades proposed by recent molecular works. A relaxed molecular clock dating approach provided a time framework for speciation events. We found that the Myomorpha clade shows a greater degree of variation in diversification rates than Sciuroidea, Caviomorpha, Castorimorpha and Anomaluromorpha. We identified a number of shifts in diversification rates within the major clades: two in Castorimorpha, three in Ctenohystrica, 6 within the squirrel-related clade and 24 in the Myomorpha clade. The majority of these shifts occurred within the most recent familial rodent radiations: the Cricetidae and Muridae clades. Using the topological imbalances and the time line we discuss the potential role of different diversification factors that might have shaped the rodents radiation. CONCLUSIONS: The present glimpse on the diversification pattern of rodents can be used for further comparative meta-analyses. Muroid lineages have a greater degree of variation in their diversification rates than any other rodent group. Different topological signatures suggest distinct diversification processes among rodent lineages. In particular, Muroidea and Sciuroidea display widespread distribution and have undergone evolutionary and adaptive radiation on most of the continents. Our results show that rodents experienced shifts in diversification rate regularly through the Tertiary, but at different periods for each clade. A comparison between the rodent fossil record and our results suggest that extinction led to the loss of diversification signal for most of the Paleogene nodes.

The subfamily Dolichotinae (Rodentia, Caviidae) includes two living species (Dolichotis patagonum and D. salinicola) of cursorial, long-legged rodents that inhabit semiarid thorn scrubs and shrublands in southern South America. Some authors consider that the morphological differences between D. patagonum and D. salinicola warrant circumscription of the latter in its own genus, Pediolagus. Based on a phylogeny and divergence times grounded on molecular data, as well as a qualitative and quantitative assessment of morphological differences, the distinction between Dolichotis and Pediolagus is equal to or greater than differences seen for other intergeneric comparisons within Cavioidea. Based on these results, we argue that the taxonomic designations of Dolichotis and Pediolagus should be retained.

The genus Dasyprocta Illiger, 1811 includes at least 13 species of medium-sized caviomorph rodents, widely distributed from Mexico to northern Argentina. Despite being abundant, largely diurnal, and easily identifiable by their external traits, the taxonomy of this genus remains poorly understood. In this work, we reviewed the taxonomy of Dasyprocta along the Andes and adjoining lowland areas of the western Neotropics, including samples from Mexico to northern Argentina, with emphasis on two species largely confounded—sometimes considered as synonyms—during the last century: D. punctataGray, 1842 and D. variegataTschudi, 1845. In the construction of our taxonomic hypotheses, we use a purely morphological approach, emphasizing qualitative and quantitative cranial features and external traits (color patterns). The results of multivariate statistical analysis and differences in color patterns support the species-level validity of D. punctata and D. variegata. Within this latter nominal form, we also include those populations from northern Argentina and eastern Bolivia that recently were referred to D. azarae. Based on our results, D. punctata (including bellula, callida, candelensis, chiapensis, chocoensis, colombiana, dariensis, isthmica, nuchalis, richmondi, underwoodi, yucatanica, and zuliae) extends from southern Mexico to Colombia, Ecuador, northernmost Peru, and western Venezuela, while D. variegata (including azarae, boliviae, and yungarum) is distributed from south–central Peru and southwestern Brazil to Bolivia and northwestern Argentina.

We combine morphological (qualitative and quantitative data) and genetic (one mitochondrial and one nuclear gene) data from a large set of specimens of Octodon from the four currently recognized living species of the genus. The integration of the results (qualitative assessment, multivariate analysis of cranial measurements, and gene trees) allows us to state that 1) the current taxonomic scheme does not reflect the species diversity of Octodon; 2) in particular, as currently understood O. bridgesii likely is a complex of three species; 3) one of these, encompassing the southern populations of the genus, in the Araucanía Region (Chile) and Neuquén Province (Argentina), is named and described here as a new species; and 4) the mitochondrial gene tree departs from the nuclear gene tree with respect to O. pacificus and the new species here described.

Ctenomys Blainville 1826 is one of the most diverse genera of South American caviomorph rodents. Currently, six species of this genus are reported from Patagonia, south of 42°S. In this contribution, we assessed the taxonomic status of several populations from eastern and central Chubut province, northern Patagonia. Based on phylogenetic analyses of DNA sequences, morphology assessment (qualitative and quantitative), and previously published karyological data, we describe three new species of this genus, one formed by two subspecies, endemic to northern Patagonia. In addition, we include C. coyhaiquensis Kelt and Gallardo 1994 into the synonymy of C. sericeus J.A. Allen 1903. Finally, we discussed the need for additional integrative approaches, including field collection of specimens, to better understand the diversity of this highly speciose rodent genus.

The pacarana ( Dinomys branickii ) is among the rarest of mammals under human care, with few research about the species health. This study is aimed at describing for the first time values for pacaranas under human care for commonly used hematologic and blood chemistry parameters. After the physical restraint, animals were anesthetized with a combination of dexmedetomidine, midazolam, and butorphanol for preventive medical exams. Based on phylogenetic and morphological proximity, the data from the present study were compared with data from a worldwide zoological databank, Zoological Information Management System (ZIMS) for chinchillas ( Chinchilla lanigera ), prehensile-tailed porcupines ( Coendou prehensilis ), and capybaras ( Hydrochoerus hydrochaeris ). For most of the hematological and biochemical values, pacaranas were similar to the data reported to prehensile-tailed porcupines. This information will be valuable for future initiatives to assess the health of individuals arriving in rehabilitation centers and kept in zoological institutions.

The fossil-bearing stratigraphic sections of the Solimões Formation (southwestern Brazilian Amazonia) are exposed mainly along the Juruá, Purus, and Acre rivers, and in road cuts. These deposits have provided fossils of the four main lineages of Caviomorpha – Cavioidea, Erethizontoidea, Octodontoidea, and Chinchilloidea, contributing to the understanding on the evolution of tropical Neogene rodents. Herein, our knowledge about fossil rodents from this region is reviewed. New specimens are recorded, including taxa mentioned for this region for the first time, such as basal cavioids, Dolichotinae, Caviodon (Hydrochoeridae), and Drytomomys (Dinomyidae). Unfortunately, the deposits have no absolute ages, and based on palynological data and the biochronology of several taxa (mainly mammals), the encompassed fauna has been constrained to the late Miocene. However, some rodent lineages recorded here seem to be more related to older faunas, from the middle Miocene and Paleogene. Regarding the biogeographic and paleoenvironmental affinities, most of the Neogene rodents from the Acre region show more similarities to those from the Entre Rios, Argentina, and Urumaco, Venezuela, where wet environments were present during Neogene times. An increase in prospecting along southwestern Amazonian rivers looking for rodents (among other vertebrates) associated with methods to better constrain the ages of these faunal assemblages will contribute to a better understanding of the evolution of the tropical rodents as well as the stratigraphy and age of that portion of the basin.

The genus Ctenomys of subterranean rodents is one of the most species-rich genera of Mammalia, with 66 living species currently recognized. However, the taxonomy of the genus is dynamic with several new species and new synonymies proposed during the last decade. One of the species groups that have undergone more changes in contents in the last years is the Ctenomys mendocinus species group. Here, based on phylogenetic analysis of mitochondrial DNA sequences and qualitative and quantitative morphological evidence, we conducted an appraisal of the species richness of tuco-tucos of the C. mendocinus species group, describing two new species from west-central Argentina. The new taxa are morphometrically distinctive when compared with other geographically or phylogenetically close species of the genus, showing qualitative differences in their craniodental anatomy. One of the new species is known from the eastern Andean slopes of La Rioja and San Juan provinces, occurring on montane grasslands and shrublands above 3,500 m a.s.l., while the other is endemic of southwestern Mendoza province, occurring on montane grasslands and shrublands between 2,400–2,700 m a.s.l. In addition, we include for the first time the nominal forms C. fochi and C. validus in a phylogenetic analysis of the genus Ctenomys , showing that both correspond to the C. mendocinus species group, being the second a junior synonym of C. mendocinus . Finally, we made some comments about other candidate species within this species group as well as highlight issues that need to be addressed to gain a robust picture of the specific richness of Ctenomys .

The study of the cranial endocast provides valuable information to understand the behavior of an organism because it coordinates sensory information and motor functions. In this work, we describe for the first time the anatomy of the encephalon of an early Miocene pan-octodontoid caviomorph rodent (Prospaniomys priscus Ameghino, 1902) found in the Argentinean Patagonia, based on a virtual 3D endocast. This fossil rodent has an endocast morphology here considered ancestral for Pan-Octodontoidea and other South American caviomorph lineages, i.e., an encephalon with anteroposteriorly aligned elements, mesencephalon dorsally exposed, well-developed vermis of the cerebellum, and rhombic cerebral hemispheres with well-developed temporal lobes. Prospaniomys Ameghino, 1902 also has relatively small olfactory bulbs, large paraflocculi of the cerebellum, and low endocranial volume and degree of neocorticalization. Its encephalization quotient is low compared with Paleogene North American and European noncaviomorph rodents, but slightly higher than in several late early and late Miocene caviomorphs. Paleoneurological anatomical information supports the hypothesis that Prospaniomys was a generalist caviomorph rodent with terrestrial habits and enhanced low-frequency auditory specializations. The scarce paleoneurological information indicates that several endocast characters in caviomorph rodents could change with ecological pressures. This work sheds light on the anatomy and evolution of several paleoneurological aspects of this particular group of South American rodents.