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Priority effects shape the assembly of free-living communities and host-associated communities. However, the current literature does not fully incorporate two features of host–symbiont interactions, correlated host responses to multiple symbionts and ontogenetic changes in host responses to symbionts, leading to an incomplete picture of the role of priority effects in host-associated communities. We factorially manipulated the inoculation timing of two plant symbionts (mutualistic rhizobia bacteria and parasitic root-knot nematodes) and tested how host age at arrival, arrival order, and arrival synchrony affected symbiont colonization success in themodel legume Medicago truncatula. We found that host age, arrival order, and arrival synchrony significantly affected colonization of one or both symbionts. Host age at arrival only affected nematodes but not rhizobia: younger plants were more heavily infected than older plants. By contrast, arrival order only affected rhizobia but not nematodes: plants formed more rhizobia nodules when rhizobia arrived before nematodes. Finally, synchronous arrival decreased colonization both symbionts, an effect that depended on host age. Our results demonstrate that priority effects compromise the host’s ability to control colonization by two major symbionts and suggest that the role of correlated host responses and host ontogeny in the assembly of host-associated communities deserve further attention.

Root-knot nematodes, Meloidogyne spp., are obligate endoparasites that maintain a biotrophic relationship with their hosts. They infect roots as microscopic vermiform second-stage juveniles, and establish specialized feeding structures called ‘giant-cells’, from which they withdraw water and nutrients. The nematode effector proteins secreted in planta are key elements in the molecular dialogue of parasitism. Here, we compared Illumina RNA-seq transcriptomes for M. incognita obtained at various points in the lifecycle, and identified 31 genes more strongly expressed in parasitic stages than in preparasitic juveniles. We then selected candidate effectors for functional characterization. Quantitative real-time PCR and in situ hybridizations showed that the validated differentially expressed genes are predominantly specifically expressed in oesophageal glands of the nematode. We also soaked the nematodes in siRNA to silence these genes and to determine their role in pathogenicity. The silencing of the dorsal gland specific-Minc18876 and its paralogues resulted in a significant, reproducible decrease in the number of mature females with egg masses, demonstrating a potentially important role for the small glycine- and cysteine-rich effector MiSGCR1 in early stages of plant-nematode interaction. Finally, we report that MiSGCR1 suppresses plant cell death induced by bacterial or oomycete triggers of plant defense.

Root-knot nematodes (RKNs; Meloidogyne spp.) are plant parasites with a broad host range causing great losses worldwide. To parasitize their hosts, RKNs establish feeding sites in roots known as giant cells. The majority of work studying plant–RKN interactions in susceptible hosts addresses establishment of the giant cells and there is limited information on the early defense responses. Here we characterized early defense or pattern-triggered immunity (PTI) against RKNs in Arabidopsis thaliana. To address PTI, we evaluated known canonical PTI signaling mutants with RKNs and investigated the expression of PTI marker genes after RKN infection using both quantitative PCR and β-glucuronidase reporter transgenic lines. We showed that PTI-compromised plants have enhanced susceptibility to RKNs, including the bak1-5 mutant. BAK1 is a common partner of distinct receptors of microbe- and damage-associated molecular patterns. Furthermore, our data indicated that nematode recognition leading to PTI responses involves camalexin and glucosinolate biosynthesis. While the RKN-induced glucosinolate biosynthetic pathway was BAK1-dependent, the camalexin biosynthetic pathway was only partially dependent on BAK1. Combined, our results indicate the presence of BAK1-dependent and -independent PTI against RKNs in A. thaliana, suggesting the existence of diverse nematode recognition mechanisms.

Galls induced by plant-parasitic nematodes involve a hyperactivation of the plant mitotic and endocycle machinery for their profit. Dedifferentiation of host root cells includes drastic cellular and molecular readjustments. In such background, potential DNA damage in the genome of gall cells is eminent. We questioned if DNA damage checkpoints activation followed by DNA repair occurred, or was eventually circumvented, in nematode-induced galls. Galls display transcriptional activation of the DNA damage checkpoint kinase WEE1, correlated with its protein localization in the nuclei. The promoter of the stress marker gene SMR7 was evaluated under the WEE1-knockout background. Drugs inducing DNA damage and a marker for DNA repair, PARP1 were used to understand mechanisms that might cope with DNA damage in galls. Our functional study revealed that gall cells lacking WEE1 conceivably entered mitosis prematurely disturbing the cell cycle despite the loss of genome integrity. The disrupted nuclei phenotype in giant cells hinted to the accumulation of mitotic defects. As well, WEE1-knockout in Arabidopsis and downregulation in tomato repressed infection and reproduction of root-knot nematodes. Together with data on DNA damaging drugs, we suggest a conserved function for WEE1 controlling a G1/S cell cycle arrest in response to replication defect in galls.

Root-knot nematodes (RKNs) Meloidogyne spp. cause major damage to cultivated woody plants. Among them, Prunus, grapevine and coffee are the crops most infested by worldwide polyphagous species and species with a more limited distribution and/or narrower host range. The identification and characterization of natural sources of resistance are important steps to develop RKN control strategies. In woody crops, resistant rootstocks genetically different from the scion of agronomical interest may be engineered. We describe herein the interactions between RKNs and different woody crops, and highlight the plant species in which resistance and corresponding resistance (R) genes have been discovered. Even though grapevine and, to a lesser extent, coffee have a history of rootstock selection for RKN resistance, few cases of resistance have been documented. By contrast, in Prunus, R genes with different spectra have been mapped in plums, peach and almond and can be pyramided for durable resistance in interspecific rootstocks. We particularly discuss here the Ma Toll/interleukin-1 receptor-likenucleotide binding-leucine-rich repeat gene from Myrobalan plum, one of the longest plant R genes cloned to date, due to its unique biological and structural properties. RKN R genes in Prunus will enable us to carry out molecular studies aimed at improving our knowledge of plant immunity in woody plants.

Soil biotic and abiotic factors can affect the interaction between invasive and native species. However, it is not yet clear how arbuscular mycorrhizal (AM) symbiosis affects the interaction between adult invasive plants and neighboring seedlings. We used an invasive weed (Bidens frondosa) to test the hypothesis that adult invasive plants facilitate the growth of neighboring seedlings through AM symbiosis, and this facilitation can be inhibited by the biological stress of root‐knot nematode infection. The results showed that the height and total biomass of seedlings near the adult plant increased, indicating that the belowground effects mediated by AM symbiosis played a facilitative role. The positive growth response to resource allocation between adult plant and neighboring seedlings through mycorrhizal connection was inhibited when adult plants were infected by root‐knot nematode. Only the total biomass and root–shoot ratio of adult plants were increased, while seedling growth performance did not change. Our results supported the hypothesis that adult invasive plants can facilitate their neighboring seedlings growth through AM symbiosis and the benefits vary with biotic stress on adult plant. These findings provided important evidence to explain the role of AM symbiosis in plant invasion.

The control of plant parasitic nematodes is an increasing problem. A key process during the infection is the induction of specialized nourishing cells, called giant cells (GCs), in roots. Understanding the function of genes required for GC development is crucial to identify targets for new control strategies. We propose a standardized method for GC phenotyping in different plant genotypes, like those with modified genes essential for GC development. The method combines images obtained by bright-field microscopy from the complete serial sectioning of galls with TrakEM2, specialized three-dimensional (3D) reconstruction software for biological structures. The volumes and shapes from 162 3D models of individual GCs induced by Meloidogyne javanica in Arabidopsis were analyzed for the first time along their life cycle. A high correlation between the combined volume of all GCs within a gall and the total area occupied by all the GCs in the section/s where they show maximum expansion, and a proof of concept from two Arabidopsis transgenic lines (J0121 >> DTA and J0121 >> GFP) demonstrate the reliability of the method. We phenotyped GCs and developed a reliable simplified method based on a two-dimensional (2D) parameter for comparison of GCs from different Arabidopsis genotypes, which is also applicable to galls from different plant species and in different growing conditions, as thickness/transparency is not a restriction.

Brazil is the largest coffee-producing nation in the world. Over 50% of the national production comes from the Minas Gerais state, with relevant contribution of the region covered by the Cerrado biome. Given the threat posed by root-knot nematodes (RKN, Meloidogyne spp.) to coffee production, we collected plant and soil samples from infested plantations across 16 counties and identified the species of this pathogen. Based on the female perineal patterns, male morphology, esterase phenotypes and SCAR markers, the species found were Meloidogyne exigua, Meloidogyne paranaensis, Meloidogyne incognita and Meloidogyne arenaria. The most prevalent species was M. exigua, occurring in 83.8% of the sampled sites, followed by M. paranaensis (19%) and M. incognita (4.9%). Mixed populations of RKN were observed in 7.7% of the sites, with the highest prevalence of M. exigua + M. paranaensis and M. paranaensis + M. incognita, followed by M. exigua + M. incognita. Meloidogyne arenaria was found in one site, in a mixed population with M. paranaensis + M. exigua. Strategies to prevent the spread of these nematodes to non-infested areas are highly recommended, particularly focusing on the most aggressive species such as M. paranaensis and M. incognita.

Background and Aims Root‐knot nematodes (Meloidogyne spp.) are endo‐parasites of plant roots and parasitisation can lead to diminished grape yields. Worldwide viticulture production is impacted primarily by four species of root‐knot nematode (Meloidogyne arenaria, Meloidogyne hapla, Meloidogyne incognita and Meloidogyne javanica). Meloidogyne javanica is the predominant root‐knot nematode found in Australian vineyards. A glasshouse‐based experiment was conducted to identify grapevine cultivars and accessions with complete resistance (i.e. no reproduction of nematode) to an aggressive pathotype of M. javanica isolated from an Australian vineyard. Methods and Results Single‐grapevine plants were inoculated with approximately 1500 second stage juveniles of M. javanica in a replicated study. Six weeks after inoculation, roots were washed free of soil, and egg masses were stained and tallied. The final dry mass of roots was measured to determine the ratio of egg masses to root mass. Conclusions Complete resistance to M. javanica was found in 42 of 75 Vitis cultivars and accessions screened. Significance of Study The M. javanica resistant cultivars and accessions identified in this study provide valuable material for future breeding in order to develop new rootstocks for the Australian wine and grape industry with durable resistance to root‐knot nematode.

Root knot nematodes (RKN, Meloidogyne spp.) are serious pathogens of numerous crops worldwide. Understanding the roles plant rhizosphere soil microbiome play during RKN infection is very important. The current study aims at investigating the impacts of soil microbiome on the activity of RKN. In this study, the 16S rRNA genes of the bacterial communities from nematode-infested and non-infested rhizosphere soils from four different plants were sequenced on the Illumina Hi-Seq platform. The soil microbiome effects on RKN infection were tested in a greenhouse assay. The non-infested soils had more microbial diversity than the infested soils from all plant rhizospheres, and both soil types had exclusive microbial communities. The inoculation of the microbiomes from eggplant and cucumber non-infested soils to tomato plants significantly alleviated the RKN infection, while the microbiome from infested soil showed increased the RKN infection. Furthermore, bacteria Pseudomonas sp. and Bacillus sp. were screened out from non-infested eggplant soil and exhibited biocontrol activity to RKN on tomato. Our findings suggest that microbes may regulate RKN infection in plants and are involved in biocontrol of RKN.