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result(s) for
"structure-function"
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Gradients of structure–function tethering across neocortex
by
Vázquez-Rodríguez, Bertha
,
Shafiei, Golia
,
Markello, Ross D.
in
Adult
,
Biological Sciences
,
Brain
2019
The white matter architecture of the brain imparts a distinct signature on neuronal coactivation patterns. Interregional projections promote synchrony among distant neuronal populations, giving rise to richly patterned functional networks. A variety of statistical, communication, and biophysical models have been proposed to study the relationship between brain structure and function, but the link is not yet known. In the present report we seek to relate the structural and functional connection profiles of individual brain areas. We apply a simple multilinear model that incorporates information about spatial proximity, routing, and diffusion between brain regions to predict their functional connectivity. We find that structure–function relationships vary markedly across the neocortex. Structure and function correspond closely in unimodal, primary sensory, and motor regions, but diverge in transmodal cortex, particularly the default mode and salience networks. The divergence between structure and function systematically follows functional and cytoarchitectonic hierarchies. Altogether, the present results demonstrate that structural and functional networks do not align uniformly across the brain, but gradually uncouple in higher-order polysensory areas.
Journal Article
Development of structure–function coupling in human brain networks during youth
by
Moore, Tyler M.
,
Bassett, Danielle S.
,
Baum, Graham L.
in
Adolescent
,
Adolescent Development - physiology
,
Adolescents
2020
SignificanceThe human brain is organized into a hierarchy of functional systems that evolve in childhood and adolescence to support the dynamic control of attention and behavior. However, it remains unknown how developing white-matter architecture supports coordinated fluctuations in neural activity underlying cognition. We document marked remodeling of structure–function coupling in youth, which aligns with cortical hierarchies of functional specialization and evolutionary expansion. Further, we demonstrate that structure–function coupling in rostrolateral prefrontal cortex supports age-related improvements in executive ability. These findings have broad relevance for accounts of experience-dependent plasticity in healthy development and abnormal development associated with neuropsychiatric illness.
The protracted development of structural and functional brain connectivity within distributed association networks coincides with improvements in higher-order cognitive processes such as executive function. However, it remains unclear how white-matter architecture develops during youth to directly support coordinated neural activity. Here, we characterize the development of structure–function coupling using diffusion-weighted imaging and n-back functional MRI data in a sample of 727 individuals (ages 8 to 23 y). We found that spatial variability in structure–function coupling aligned with cortical hierarchies of functional specialization and evolutionary expansion. Furthermore, hierarchy-dependent age effects on structure–function coupling localized to transmodal cortex in both cross-sectional data and a subset of participants with longitudinal data (n = 294). Moreover, structure–function coupling in rostrolateral prefrontal cortex was associated with executive performance and partially mediated age-related improvements in executive function. Together, these findings delineate a critical dimension of adolescent brain development, whereby the coupling between structural and functional connectivity remodels to support functional specialization and cognition.
Journal Article
Recent Advances in Marine Algae Polysaccharides: Isolation, Structure, and Activities
by
Huang, Xuesong
,
Cheong, Kit-Leong
,
Xu, Shu-Ying
in
Algae
,
Anticancer properties
,
Antioxidants
2017
Marine algae have attracted a great deal of interest as excellent sources of nutrients. Polysaccharides are the main components in marine algae, hence a great deal of attention has been directed at isolation and characterization of marine algae polysaccharides because of their numerous health benefits. In this review, extraction and purification approaches and chemico-physical properties of marine algae polysaccharides (MAPs) are summarized. The biological activities, which include immunomodulatory, antitumor, antiviral, antioxidant, and hypolipidemic, are also discussed. Additionally, structure-function relationships are analyzed and summarized. MAPs’ biological activities are closely correlated with their monosaccharide composition, molecular weights, linkage types, and chain conformation. In order to promote further exploitation and utilization of polysaccharides from marine algae for functional food and pharmaceutical areas, high efficiency, and low-cost polysaccharide extraction and purification methods, quality control, structure-function activity relationships, and specific mechanisms of MAPs activation need to be extensively investigated.
Journal Article
Structure-Functional Activity Relationship of β-Glucans From the Perspective of Immunomodulation: A Mini-Review
by
Han, Biao
,
Vanrompay, Daisy
,
Cox, Eric
in
Animals
,
beta-Glucans - chemistry
,
beta-Glucans - immunology
2020
β-Glucans are a heterogeneous group of glucose polymers with a common structure comprising a main chain of β-(1,3) and/or β-(1,4)-glucopyranosyl units, along with side chains with various branches and lengths. β-Glucans initiate immune responses via immune cells, which become activated by the binding of the polymer to specific receptors. However, β-glucans from different sources also differ in their structure, conformation, physical properties, binding affinity to receptors, and thus biological functions. The mechanisms behind this are not fully understood. This mini-review provides a comprehensive and up-to-date commentary on the relationship between β-glucans' structure and function in relation to their use for immunomodulation.
Journal Article
High rates of primary production in structurally complex forests
by
Hardiman, Brady S.
,
Fahey, Robert T.
,
Gough, Christopher M.
in
Biodiversity
,
Biomass
,
biomass production
2019
Structure–function relationships are central to many ecological paradigms. Chief among these is the linkage of net primary production (NPP) with species diversity and canopy structure. Using the National Ecological Observatory Network (NEON) as a subcontinental-scale research platform, we examined how temperate-forest NPP relates to several measures of site-level canopy structure and tree species diversity. Novel multidimensional canopy traits describing structural complexity, most notably canopy rugosity, were more strongly related to site NPP than were species diversity measures and other commonly characterized canopy structural features. The amount of variation in site-level NPP explained by canopy rugosity alone was 83%, which was substantially greater than that explained individually by vegetation area index (31%) or Shannon’s index of species diversity (30%). Forests that were more structurally complex, had higher vegetation-area indices, or were more diverse absorbed more light and used light more efficiently to power biomass production, but these relationships were most strongly tied to structural complexity. Implications for ecosystem modeling and management are wide ranging, suggesting structural complexity traits are broad, mechanistically robust indicators of NPP that, in application, could improve the prediction and management of temperate forest carbon sequestration.
Journal Article
Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila
by
Taipale, Mikko
,
Rao, Chitong
,
Osipiuk, Jerzy
in
Automation
,
Bacteria
,
Bacterial Proteins - genetics
2016
Pathogens deliver complex arsenals of translocated effector proteins to host cells during infection, but the extent to which these proteins are regulated once inside the eukaryotic cell remains poorly defined. Among all bacterial pathogens,
Legionella pneumophila
maintains the largest known set of translocated substrates, delivering over 300 proteins to the host cell via its Type IVB, Icm/Dot translocation system. Backed by a few notable examples of effector–effector regulation in
L. pneumophila
, we sought to define the extent of this phenomenon through a systematic analysis of effector–effector functional interaction. We used
Saccharomyces cerevisiae
, an established proxy for the eukaryotic host, to query > 108,000 pairwise genetic interactions between two compatible expression libraries of ~330
L. pneumophila‐
translocated substrates. While capturing all known examples of effector–effector suppression, we identify fourteen novel translocated substrates that suppress the activity of other bacterial effectors and one pair with synergistic activities. In at least nine instances, this regulation is direct—a hallmark of an emerging class of proteins called metaeffectors, or “effectors of effectors”. Through detailed structural and functional analysis, we show that metaeffector activity derives from a diverse range of mechanisms, shapes evolution, and can be used to reveal important aspects of each cognate effector's function. Metaeffectors, along with other, indirect, forms of effector–effector modulation, may be a common feature of many intracellular pathogens—with unrealized potential to inform our understanding of how pathogens regulate their interactions with the host cell.
Synopsis
Pairwise genetic interaction mapping between
Legionella pneumophila
effectors, followed by functional and structural analyses, reveals diverse mechanisms of effector–effector modulation.
Over 220
L. pneumophila
effectors cause a growth defect when ectopically expressed in
S. cerevisiae
, likely reflective of targeting fundamental eukaryotic biology.
Pairwise genetic‐interaction mapping between effectors uncovers 14 instances where one or more effectors rescue another's growth defect and one in which two effectors specifically synergize to restrict yeast growth.
Protein–protein interactions indicate direct effector‐effector regulation (metaeffector activity) for nine pairs.
Structure‐function analyses, including the first ever effector–metaeffector complex crystal structure, reveal a diversity of mechanisms supporting effector–effector modulation.
Graphical Abstract
Pairwise genetic interaction mapping between
Legionella pneumophila
effectors, followed by functional and structural analyses, reveals diverse mechanisms of effector–effector modulation.
Journal Article
Cliques of Neurons Bound into Cavities Provide a Missing Link between Structure and Function
2017
The lack of a formal link between neural network structure and its emergent function has hampered our understanding of how the brain processes information. We have now come closer to describing such a link by taking the direction of synaptic transmission into account, constructing graphs of a network that reflect the direction of information flow, and analyzing these directed graphs using algebraic topology. Applying this approach to a local network of neurons in the neocortex revealed a remarkably intricate and previously unseen topology of synaptic connectivity. The synaptic network contains an abundance of cliques of neurons bound into cavities that guide the emergence of correlated activity. In response to stimuli, correlated activity binds synaptically connected neurons into functional cliques and cavities that evolve in a stereotypical sequence toward peak complexity. We propose that the brain processes stimuli by forming increasingly complex functional cliques and cavities.
Journal Article
Edges in brain networks: Contributions to models of structure and function
by
Sporns, Olaf
,
Faskowitz, Joshua
,
Betzel, Richard F
in
Brain
,
Brain architecture
,
Communication
2022
Network models describe the brain as sets of nodes and edges that represent its distributed organization. So far, most discoveries in network neuroscience have prioritized insights that highlight distinct groupings and specialized functional contributions of network nodes. Importantly, these functional contributions are determined and expressed by the web of their interrelationships, formed by network edges. Here, we underscore the important contributions made by brain network edges for understanding distributed brain organization. Different types of edges represent different types of relationships, including connectivity and similarity among nodes. Adopting a specific definition of edges can fundamentally alter how we analyze and interpret a brain network. Furthermore, edges can associate into collectives and higher order arrangements, describe time series, and form edge communities that provide insights into brain network topology complementary to the traditional node-centric perspective. Focusing on the edges, and the higher order or dynamic information they can provide, discloses previously underappreciated aspects of structural and functional network organization.
Journal Article
Structural-functional brain network coupling predicts human cognitive ability
by
Sporns, Olaf
,
Thiele, Jonas A.
,
Faskowitz, Joshua
in
Brain mapping
,
Brain research
,
Cognition & reasoning
2024
•Brain structure-function coupling captured by network communication models.•Stronger structure-function coupling is linked to higher general cognitive ability.•Region-specific coupling strategies predict individual cognitive ability scores.•Prediction model generalizes across independent samples.•Efficient cognitive processing may depend on region-specific coupling strategies.
Individual differences in general cognitive ability (GCA) have a biological basis within the structure and function of the human brain. Network neuroscience investigations revealed neural correlates of GCA in structural as well as in functional brain networks. However, whether the relationship between structural and functional networks, the structural-functional brain network coupling (SC-FC coupling), is related to individual differences in GCA remains an open question. We used data from 1030 adults of the Human Connectome Project, derived structural connectivity from diffusion weighted imaging, functional connectivity from resting-state fMRI, and assessed GCA as a latent g-factor from 12 cognitive tasks. Two similarity measures and six communication measures were used to model possible functional interactions arising from structural brain networks. SC-FC coupling was estimated as the degree to which these measures align with the actual functional connectivity, providing insights into different neural communication strategies. At the whole-brain level, higher GCA was associated with higher SC-FC coupling, but only when considering path transitivity as neural communication strategy. Taking region-specific variations in the SC-FC coupling strategy into account and differentiating between positive and negative associations with GCA, allows for prediction of individual cognitive ability scores in a cross-validated prediction framework (correlation between predicted and observed scores: r = 0.25, p < .001). The same model also predicts GCA scores in a completely independent sample (N = 567, r = 0.19, p < .001). Our results propose structural-functional brain network coupling as a neurobiological correlate of GCA and suggest brain region-specific coupling strategies as neural basis of efficient information processing predictive of cognitive ability.
Journal Article
Dynamic and Static Structure–Function Coupling With Machine Learning for the Early Detection of Alzheimer's Disease
2025
The progression of Alzheimer's disease (AD) involves complex changes in brain structure and function that are driven by their interaction, making structure–function coupling (SFC) a valuable indicator for early detection of AD. Static SFC refers to the overall structure–function interaction, whereas dynamic SFC refers to transient coupling variations. In this study, we aimed to assess the potential of combining static and dynamic SFC with machine learning (ML) for the early detection of AD. We analyzed a discovery cohort and an external validation cohort, including AD, mild cognitive impairment (MCI), and healthy control (HC) groups. Then, we quantified differences between static SFC and dynamic SFC at different stages of AD progression. Feature selection was performed using ElasticNet. A Gaussian naive Bayes (GNB) classifier was used to test the ability of SFC to classify AD stages. We also analyzed the correlations between SFC features and early AD physiological biomarkers. Static SFC increased with AD progression, whereas dynamic SFC showed greater variability and decreased stability. Using SFC features selected by ElasticNet, the GNB classifier achieved high performance in differentiating between the HC and MCI stages (area under the curve [AUC] = 91.1%) and between the MCI and AD stages (AUC = 89.03%). Significant correlations were found between SFC features and physiological biomarkers. The combined use of SFC features and ML has strong potential value for the accurate classification of AD stages and significant potential value for the early detection of AD. This study demonstrates that combining static and dynamic SFC with ML provides a novel perspective for understanding the mechanisms of AD and contributes to improving its early detection. This study investigates the integration of static and dynamic structure–function coupling (SFC) for early Alzheimer's disease (AD) classification. By combining machine learning with SFC metrics, it reveals how AD alters brain network stability, offering new insights for early AD detection and pathophysiological understanding.
Journal Article