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The Genome Sequence of the SARS-Associated Coronavirus

by Barber, Sarah A. , Meyers, Adrienne , Grolla, Allen , Skowronski, Danuta M. , Upton, Chris , Brooks-Wilson, Angela , Fernando, Lisa , Drebot, Michael , Petrescu, Anca S. , Khattra, Jaswinder , Marra, Marco A. , Astell, Caroline R. , Siddiqui, Asim , Yang, George S. , Ward, Diane , Holt, Robert A. , Feldmann, Heinz , Booth, Timothy F. , Chan, Susanna Y. , Robertson, A. Gordon , Mayo, Michael , Smailus, Duane E. , Andonov, Anton , Jones, Steven , Bernard, Kathy , Gray, Michael , Girn, Noreen , Artsob, Harvey , Garbutt, Michael , Bowness, Donnie , Flick, Ramon , Freeman, Doug , McDonald, Helen , Bastien, Nathalie , Yaron S. N. Butterfield , Vogrig, Robert , Cloutier, Alison , Normand, Susan , Krajden, Mel , Tyler, Shaun , Asano, Jennifer K. , Brunham, Robert C. , Schein, Jacqueline E. , Li, Yan , Czub, Martin , Roper, Rachel L. , Leach, Stephen R. , Pandoh, Pawan K. , Griffith, Obi L. , Steven J. M. Jones , Watson, Brynn , Petric, Martin , Kabani, Amin , Tipples, Graham A. , Stott, Jeff M. , Plummer, Francis , Stroher, Ute , Montgomery, Stephen B. , Coughlin, Shaun M.

in 3' Untranslated Regions / 5' Untranslated Regions / Amino acids / Animals / Base Sequence / Biological and medical sciences / Blasts / Chemical bases / Coding / Conserved Sequence / Coronavirus / Coronavirus - classification / Coronavirus - genetics / Coronaviruses / COVID-19 / Disease Control / DNA, Complementary / Frameshifting, Ribosomal / Fundamental and applied biological sciences. Psychology / Genetic aspects / Genetics / Genome, Viral / Genomes / Genomics / Glycoproteins / Humans / Leaders / Literary Devices / Membrane Glycoproteins - chemistry / Membrane Glycoproteins - genetics / Microbiology / Nucleocapsid Proteins - chemistry / Nucleocapsid Proteins - genetics / Observations / Open Reading Frames / Phylogeny / Proteins / Regulatory Sequences, Nucleic Acid / RNA Replicase - chemistry / RNA Replicase - genetics / RNA, Viral - genetics / RNA, Viral - isolation & purification / SARS virus / SARS Virus - classification / SARS Virus - genetics / SARS Virus - isolation & purification / Sequence Analysis, DNA / Severe acute respiratory syndrome / Severe Acute Respiratory Syndrome - virology / Spike Glycoprotein, Coronavirus / Viral Envelope Proteins - chemistry / Viral Envelope Proteins - genetics / Viral Matrix Proteins - chemistry / Viral Matrix Proteins - genetics / Viral Proteins - chemistry / Viral Proteins - genetics / Virology / Viruses

2003

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2003

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2003

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Journal Article

The Genome Sequence of the SARS-Associated Coronavirus

Barber, Sarah A.,

Meyers, Adrienne,

Grolla, Allen,

Skowronski, Danuta M.,

Upton, Chris,

Brooks-Wilson, Angela,

Fernando, Lisa,

Drebot, Michael,

Petrescu, Anca S.,

Khattra, Jaswinder,

Marra, Marco A.,

Astell, Caroline R.,

Siddiqui, Asim,

Yang, George S.,

Ward, Diane,

Holt, Robert A.,

Feldmann, Heinz,

Booth, Timothy F.,

Chan, Susanna Y.,

Robertson, A. Gordon,

Mayo, Michael,

Smailus, Duane E.,

Andonov, Anton,

Jones, Steven,

Bernard, Kathy,

Gray, Michael,

Girn, Noreen,

Artsob, Harvey,

Garbutt, Michael,

Bowness, Donnie,

Flick, Ramon,

Freeman, Doug,

McDonald, Helen,

Bastien, Nathalie,

Yaron S. N. Butterfield,

Vogrig, Robert,

Cloutier, Alison,

Normand, Susan,

Krajden, Mel,

Tyler, Shaun,

Asano, Jennifer K.,

Brunham, Robert C.,

Schein, Jacqueline E.,

Li, Yan,

Czub, Martin,

Roper, Rachel L.,

Leach, Stephen R.,

Pandoh, Pawan K.,

Griffith, Obi L.,

Steven J. M. Jones,

Watson, Brynn,

Petric, Martin,

Kabani, Amin,

Tipples, Graham A.,

Stott, Jeff M.,

Plummer, Francis,

Stroher, Ute,

Montgomery, Stephen B.,

Coughlin, Shaun M.

2003

Overview

We sequenced the 29,751-base genome of the severe acute respiratory syndrome (SARS)-associated coronavirus known as the Tor2 isolate. The genome sequence reveals that this coronavirus is only moderately related to other known coronaviruses, including two human coronaviruses, HCoV-OC43 and HCoV-229E. Phylogenetic analysis of the predicted viral proteins indicates that the virus does not closely resemble any of the three previously known groups of coronaviruses. The genome sequence will aid in the diagnosis of SARS virus infection in humans and potential animal hosts (using polymerase chain reaction and immunological tests), in the development of antivirals (including neutralizing antibodies), and in the identification of putative epitopes for vaccine development.

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Publisher

American Association for the Advancement of Science,The American Association for the Advancement of Science

Subject

3' Untranslated Regions

/ 5' Untranslated Regions

/ Amino acids

/ Animals

/ Base Sequence

/ Biological and medical sciences

/ Blasts