Journal Article

Evaluation of Xpert Carba-R Assay for the Detection of Carbapenemase Genes in Gram-Negative Bacteria

Xie, Tian-Ao, Li, Hou-He, He, Zhi-Jian, Guo, Xu-Guang, Zhang, Jin-Sheng, Fan, Shu-Jin, Xie, Li-Min

2021

Overview

Introduction. High mortality associated with carbapenemase-producing Gram-negative bacteria (CP-GNB) has evolved into a global health threat. Rapid and accurate detection as well as prompt treatment are of great significance in this case. Xpert Carba-R, a multiple qualitative analysis designed to detect five clinically relevant carbapenem-resistant gene families within one hour, is regarded as reliable, accurate, and easy-to-operate. This study is to present a systematic evaluation of the performance of Xpert Carba-R in detecting carbapenemase genes in GNB suspected for carbapenemase production. Methods. We searched and screened the literature on “Xpert Carba-R” in the database of PubMed, Web of Science, Embase, and Cochrane Library, employing two independent evaluators to collect data, respectively. Then, statistical analysis of the data obtained was performed by the Stata 12.0 software to measure the accuracy of Xpert Carba-R assay in detecting the carbapenemase genes in GNB. Results. We screened a total of 1767 Gram-negative bacillus isolates documented in 9 articles. The precision of the detection of OXA-48 carbapenemase genes was 100%; that of NDM=100%; that of VIM=100%. When it came to KPC, the precision rate was 100%; that of IMP=99%. The overall accuracy of the detection of carbapenemase genes was 100%. Conclusions. Xpert Carba-R assay demonstrates a 100% precision in identifying carbapenemase genes in GNB. It can be seen that Xpert Carba-R method is an effective tool for early clinical detection, which is suitable for the detection of carbapenase gene in GNB.

• Publisher: Hindawi,John Wiley & Sons, Inc
• Subject: Accuracy / Analysis / Antibiotics / Assaying / Bacteria / Bacterial infections / Bacterial Proteins - genetics / Beta lactamases / beta-Lactamases - genetics / Carbapenemase / Causes of / Data analysis / Data collection / Enzyme Assays - methods / Evaluation / Gene families / Genes / Genetic aspects / Global health / Gram-negative bacteria / Gram-Negative Bacteria - enzymology / Gram-Negative Bacteria - genetics / Gram-Negative Bacteria - isolation & purification / Health aspects / Health risks / Humans / Identification and classification / Libraries / Methods / Performance evaluation / Polymerase chain reaction / Production methods / Public health / Publication Bias / Qualitative analysis / Research methodology / Software / Species Specificity / Statistical analysis