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DNA-Based Methods for the Detection and the Identification of Phytoplasmas in Insect Vector Extracts
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DNA-Based Methods for the Detection and the Identification of Phytoplasmas in Insect Vector Extracts
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Journal Article
DNA-Based Methods for the Detection and the Identification of Phytoplasmas in Insect Vector Extracts
2002
Overview
DNA extraction and storage methods have been evaluated with laboratory-reared leafhoppers and/or field-collected leafhoppers and psyllids. Detection of four different phytopathogenic phytoplasmas, belonging to three taxonomic groups, has been achieved by several direct or nested polymerase chain reaction (PCR) methods with such DNA extracts. Reactions differed in both the 16/23S ribosomal primer pairs used and the specific assay and cycling conditions. Merits and possible hindrances of the various primer pairs, in relation to insect DNA extracts, are discussed. However, identification of the phytoplasma(s) necessarily relied on comparison of the polymorphism in length of the amplified DNA fragments obtained by restriction with appropriate endonucleases. Endonuclease digestion is crucial for determining the identity (subgroup affiliation) of phytoplasmas of the same groups that can be carried by an individual vector.
Publisher
Humana Press,Springer Nature B.V
Subject
/ Animals
/ Biological and medical sciences
/ DNA
/ DNA, Bacterial - isolation & purification
/ Fundamental and applied biological sciences. Psychology
/ genetics
/ In vitro gene amplification. Pcr technique
/ Insect Vectors - microbiology
/ Insects
/ methods
/ Methods. Procedures. Technologies
/ Plasma
/ Polymerase Chain Reaction - methods
/ Polymorphism, Restriction Fragment Length
/ restriction fragment length polymorphism
/ Restriction Mapping - methods
/ Sequence Analysis, DNA - methods
/ Studies
