Journal Article

A Dual-Segmentation Framework for the Automatic Detection and Size Estimation of Shrimp

Mohamed, Heba G., Kim, Sang Cheol, Zhou, Heng, Waqar, Malik Muhammad, Ali, Hassan, Strzelecki, Michal

2025

Overview

In shrimp farming, determining the physical traits of shrimp is vital for assessing their health and growth. One of the critical traits is their size, as it serves as a key indicator of growth rates, biomass, and effective feed management. However, the accurate measurement of shrimp size is challenged by factors such as their naturally curved body posture, frequent overlapping among individuals, and their tendency to blend with the background, all of which hinder precise size estimation. Traditional methods for measuring the size of shrimp involve manual sampling, which is labor-intensive and time consuming. In contrast, image processing and classical computer vision techniques provide some reasonable results but often suffer from inaccuracies, making them unsuitable for large-scale monitoring. To address this problem, this paper proposes a dual-segmentation deep learning-based framework for accurately estimating shrimp size. It integrates instance segmentation using the RTMDet-m model with an enhanced semantic segmentation model to effectively predict the centerline of the shrimp’s body, enabling precise size measurements. The first stage employs the RTMDet-m model for the instance segmentation of shrimp, achieving an average precision (AP50) of 96% with fewer parameters and the highest frames per second (FPS) count among state-of-the-art models. The second stage utilizes our custom segmentation model for centerline predictive module, attaining the highest FPS and F1-score of 88.3%. The proposed framework achieves the lowest mean absolute error of 1.02 cm and a root mean square error of 1.27 cm in shrimp size estimation compared to the baseline methods discussed in comparative study sections. Our proposed dual-segmentation framework outperforms both traditional and deep learning based methods used for measuring shrimp size.

• Publisher: MDPI AG,Multidisciplinary Digital Publishing Institute (MDPI)
• Subject: Algorithms / Animals / Aquaculture / Aquaculture industry / Body Size / Cameras / computer vision / Datasets / Deep Learning / Equipment and supplies / Fish / Image processing / Image Processing, Computer-Assisted - methods / instance segmentation / Machine vision / Methods / Penaeidae - anatomy & histology / Seafood industry / semantic segmentation / Semantics / shrimp centerline extraction