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In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density
by
Wang, Shiyuan
, Yang, Qiong
, Jin, Minjun
, Tavella, Franco
in
Animals
/ Apoptosis
/ Biological Clocks
/ Biological Sciences
/ Cell cycle
/ Cell Cycle Proteins - genetics
/ Cell Cycle Proteins - metabolism
/ Cell differentiation
/ Control theory
/ Cyclin-dependent kinases
/ Cytoplasm
/ Cytoplasm - genetics
/ Cytoplasm - metabolism
/ Density
/ Dilution
/ Feedback loops
/ Hysteresis loops
/ Kinases
/ Mathematical models
/ Microfluidics
/ Models, Biological
/ Oscillations
/ Positive feedback
/ Protein Kinases - genetics
/ Protein Kinases - metabolism
/ Protein-Tyrosine Kinases - genetics
/ Protein-Tyrosine Kinases - metabolism
/ ras-GRF1 - genetics
/ ras-GRF1 - metabolism
/ Robustness (mathematics)
/ Senescence
/ Steady state
/ Switches
/ Systems Biology
/ Xenopus laevis
/ Xenopus Proteins - genetics
/ Xenopus Proteins - metabolism
2022
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In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density
by
Wang, Shiyuan
, Yang, Qiong
, Jin, Minjun
, Tavella, Franco
in
Animals
/ Apoptosis
/ Biological Clocks
/ Biological Sciences
/ Cell cycle
/ Cell Cycle Proteins - genetics
/ Cell Cycle Proteins - metabolism
/ Cell differentiation
/ Control theory
/ Cyclin-dependent kinases
/ Cytoplasm
/ Cytoplasm - genetics
/ Cytoplasm - metabolism
/ Density
/ Dilution
/ Feedback loops
/ Hysteresis loops
/ Kinases
/ Mathematical models
/ Microfluidics
/ Models, Biological
/ Oscillations
/ Positive feedback
/ Protein Kinases - genetics
/ Protein Kinases - metabolism
/ Protein-Tyrosine Kinases - genetics
/ Protein-Tyrosine Kinases - metabolism
/ ras-GRF1 - genetics
/ ras-GRF1 - metabolism
/ Robustness (mathematics)
/ Senescence
/ Steady state
/ Switches
/ Systems Biology
/ Xenopus laevis
/ Xenopus Proteins - genetics
/ Xenopus Proteins - metabolism
2022
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In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density
by
Wang, Shiyuan
, Yang, Qiong
, Jin, Minjun
, Tavella, Franco
in
Animals
/ Apoptosis
/ Biological Clocks
/ Biological Sciences
/ Cell cycle
/ Cell Cycle Proteins - genetics
/ Cell Cycle Proteins - metabolism
/ Cell differentiation
/ Control theory
/ Cyclin-dependent kinases
/ Cytoplasm
/ Cytoplasm - genetics
/ Cytoplasm - metabolism
/ Density
/ Dilution
/ Feedback loops
/ Hysteresis loops
/ Kinases
/ Mathematical models
/ Microfluidics
/ Models, Biological
/ Oscillations
/ Positive feedback
/ Protein Kinases - genetics
/ Protein Kinases - metabolism
/ Protein-Tyrosine Kinases - genetics
/ Protein-Tyrosine Kinases - metabolism
/ ras-GRF1 - genetics
/ ras-GRF1 - metabolism
/ Robustness (mathematics)
/ Senescence
/ Steady state
/ Switches
/ Systems Biology
/ Xenopus laevis
/ Xenopus Proteins - genetics
/ Xenopus Proteins - metabolism
2022
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In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density
Journal Article
In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density
2022
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Overview
Cells control the properties of the cytoplasm to ensure proper functioning of biochemical processes. Recent studies showed that cytoplasmic density varies in both physiological and pathological states of cells undergoing growth, division, differentiation, apoptosis, senescence, and metabolic starvation. Little is known about how cellular processes cope with these cytoplasmic variations. Here, we study how a cell cycle oscillator comprising cyclin-dependent kinase (Cdk1) responds to changes in cytoplasmic density by systematically diluting or concentrating cycling Xenopus egg extracts in cell-like microfluidic droplets. We found that the cell cycle maintains robust oscillations over a wide range of deviations from the endogenous density: as low as 0.2× to more than 1.22× relative cytoplasmic density (RCD). A further dilution or concentration from these values arrested the system in a low or high steady state of Cdk1 activity, respectively. Interestingly, diluting an arrested cytoplasm of 1.22× RCD recovers oscillations at lower than 1× RCD. Thus, the cell cycle switches reversibly between oscillatory and stable steady states at distinct thresholds depending on the direction of tuning, forming a hysteresis loop.We propose a mathematical model which recapitulates these observations and predicts that the Cdk1/Wee1/Cdc25 positive feedback loops do not contribute to the observed robustness, supported by experiments. Our system can be applied to study how cytoplasmic density affects other cellular processes.
Publisher
National Academy of Sciences
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