Journal Article

Transcriptomic Analysis Reveals Key Pathways Influenced by HIV-2 Vpx

Mahdi, Mohamed, Kiarie, Irene Wanjiru, Tőzsér, József, Jansson, Marianne, Linkner, Tamás Richárd, Al-Muffti, Aya Shamal, Ahmad, Hala, Szojka, Zsófia Ilona, Kunkli, Balázs, Benkő, Szilvia

2025

Overview

Viral protein X (Vpx) is a unique accessory protein encoded by the genome of the human immunodeficiency virus type 2 (HIV-2) and lineages of the simian immunodeficiency virus of sooty mangabeys. So far, counteracting the cellular restriction factor SAMHD1 and mediating the efficient translocation of viral pre-integration complex have been recognized as key functions of Vpx; however, a thorough exploration of its effects on the cellular transcriptome and cytokine milieu has not yet been undertaken. In this study, we carried out the transcriptomic analysis of THP-1 cells and determined differential gene expressions induced by HIV-2 Vpx, utilizing vectors coding for the wild-type and K68-R70 functionally restricted proteins. Significantly altered genes were then validated and quantified through real-time quantitative PCR (qPCR); additionally, replication-competent virions were also used to confirm the findings. Moreover, we analyzed the effect of Vpx expression on the secretion of key cytokines in the medium of transfected cells. Our findings revealed that wild-type HIV-2 Vpx can significantly alter the expression of genes coding for helicases, zinc finger proteins, chaperons, transcription factors and proteins involved in DNA methylation. Differentially altered genes were involved in negative regulation of viral processes, the type I interferon-signaling pathway, DNA-template transcription, elongation, the positive regulation of interferon beta production and the negative regulation of innate immune response. Importantly, Vpx was also found to decrease the expression of HIV-1 Tat, possibly through the downregulation of a crucial splicing factor, required for the maturation of Tat. Additionally, studies on cellular cytokine milieu showed that this accessory protein induced key proinflammatory cytokines. Our study provides important information about the complex role played by HIV-2 Vpx in priming and taming the cellular environment to allow for the establishment of the infection.

• Publisher: MDPI AG,MDPI
• Subject: Analysis / Biological response modifiers / Cell cycle / Cytokines - genetics / Cytokines - metabolism / Development and progression / DNA binding proteins / Enzymes / Gene Expression Profiling / Genes / Genetic research / Genetic transcription / Genomes / Genomics / Health aspects / HIV / HIV (Viruses) / HIV Infections - genetics / HIV Infections - virology / HIV-2 - genetics / HIV-2 - metabolism / Host-Pathogen Interactions / Human immunodeficiency virus / Humans / Infections / Interferon / Kinases / Medical and Health Sciences / Medical Biotechnology / Medicin och hälsovetenskap / Medicinsk bioteknologi / Methylation / Proteins / RNA polymerase / Signal Transduction / THP-1 Cells / Transcriptome / Viral infections / Viral proteins / Viral Regulatory and Accessory Proteins - genetics / Viral Regulatory and Accessory Proteins - metabolism