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Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread
by
Argimon, Silvia
, Feil, Edward J.
, Grundmann, Hajo
, David, Sophia
, Abudahab, Khalil
, Errico, Giulia
, Rossolini, Gian Maria
, Goater, Richard
, Reuter, Sandra
, Giani, Tommaso
, Aanensen, David M.
, Harris, Simon R.
, Sjunnebo, Sara
, Glasner, Corinna
, Feltwell, Theresa
, Aspbury, Marianne
in
631/181/757
/ 631/326/107
/ 631/326/22/1434
/ 631/326/41/2530
/ 692/308/174
/ Bacterial Proteins
/ Biomedical and Life Sciences
/ Carbapenem-Resistant Enterobacteriaceae - classification
/ Carbapenem-Resistant Enterobacteriaceae - genetics
/ Carbapenemase
/ Cross Infection - epidemiology
/ Cross Infection - transmission
/ Enterobacteriaceae Infections - epidemiology
/ Enterobacteriaceae Infections - transmission
/ Epidemics
/ Epidemics - classification
/ Epidemiology
/ Europe - epidemiology
/ Genetic analysis
/ Genomes
/ Hospitals
/ Humans
/ Infectious Diseases
/ Klebsiella pneumoniae
/ Life Sciences
/ Medical Microbiology
/ Microbiology
/ Molecular Epidemiology
/ Parasitology
/ Phylogeny
/ Polymorphism, Single Nucleotide
/ Propensity Score
/ Public health
/ Sequence Analysis, DNA
/ Single-nucleotide polymorphism
/ Virology
/ β-Lactam antibiotics
2019
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Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread
by
Argimon, Silvia
, Feil, Edward J.
, Grundmann, Hajo
, David, Sophia
, Abudahab, Khalil
, Errico, Giulia
, Rossolini, Gian Maria
, Goater, Richard
, Reuter, Sandra
, Giani, Tommaso
, Aanensen, David M.
, Harris, Simon R.
, Sjunnebo, Sara
, Glasner, Corinna
, Feltwell, Theresa
, Aspbury, Marianne
in
631/181/757
/ 631/326/107
/ 631/326/22/1434
/ 631/326/41/2530
/ 692/308/174
/ Bacterial Proteins
/ Biomedical and Life Sciences
/ Carbapenem-Resistant Enterobacteriaceae - classification
/ Carbapenem-Resistant Enterobacteriaceae - genetics
/ Carbapenemase
/ Cross Infection - epidemiology
/ Cross Infection - transmission
/ Enterobacteriaceae Infections - epidemiology
/ Enterobacteriaceae Infections - transmission
/ Epidemics
/ Epidemics - classification
/ Epidemiology
/ Europe - epidemiology
/ Genetic analysis
/ Genomes
/ Hospitals
/ Humans
/ Infectious Diseases
/ Klebsiella pneumoniae
/ Life Sciences
/ Medical Microbiology
/ Microbiology
/ Molecular Epidemiology
/ Parasitology
/ Phylogeny
/ Polymorphism, Single Nucleotide
/ Propensity Score
/ Public health
/ Sequence Analysis, DNA
/ Single-nucleotide polymorphism
/ Virology
/ β-Lactam antibiotics
2019
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Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread
by
Argimon, Silvia
, Feil, Edward J.
, Grundmann, Hajo
, David, Sophia
, Abudahab, Khalil
, Errico, Giulia
, Rossolini, Gian Maria
, Goater, Richard
, Reuter, Sandra
, Giani, Tommaso
, Aanensen, David M.
, Harris, Simon R.
, Sjunnebo, Sara
, Glasner, Corinna
, Feltwell, Theresa
, Aspbury, Marianne
in
631/181/757
/ 631/326/107
/ 631/326/22/1434
/ 631/326/41/2530
/ 692/308/174
/ Bacterial Proteins
/ Biomedical and Life Sciences
/ Carbapenem-Resistant Enterobacteriaceae - classification
/ Carbapenem-Resistant Enterobacteriaceae - genetics
/ Carbapenemase
/ Cross Infection - epidemiology
/ Cross Infection - transmission
/ Enterobacteriaceae Infections - epidemiology
/ Enterobacteriaceae Infections - transmission
/ Epidemics
/ Epidemics - classification
/ Epidemiology
/ Europe - epidemiology
/ Genetic analysis
/ Genomes
/ Hospitals
/ Humans
/ Infectious Diseases
/ Klebsiella pneumoniae
/ Life Sciences
/ Medical Microbiology
/ Microbiology
/ Molecular Epidemiology
/ Parasitology
/ Phylogeny
/ Polymorphism, Single Nucleotide
/ Propensity Score
/ Public health
/ Sequence Analysis, DNA
/ Single-nucleotide polymorphism
/ Virology
/ β-Lactam antibiotics
2019
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Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread
Journal Article
Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread
2019
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Overview
Public health interventions to control the current epidemic of carbapenem-resistant
Klebsiella pneumoniae
rely on a comprehensive understanding of its emergence and spread over a wide range of geographical scales. We analysed the genome sequences and epidemiological data of >1,700
K. pneumoniae
samples isolated from patients in 244 hospitals in 32 countries during the European Survey of Carbapenemase-Producing Enterobacteriaceae. We demonstrate that carbapenemase acquisition is the main cause of carbapenem resistance and that it occurred across diverse phylogenetic backgrounds. However, 477 of 682 (69.9%) carbapenemase-positive isolates are concentrated in four clonal lineages, sequence types 11, 15, 101, 258/512 and their derivatives. Combined analysis of the genetic and geographic distances between isolates with different β-lactam resistance determinants suggests that the propensity of
K. pneumoniae
to spread in hospital environments correlates with the degree of resistance and that carbapenemase-positive isolates have the highest transmissibility. Indeed, we found that over half of the hospitals that contributed carbapenemase-positive isolates probably experienced within-hospital transmission, and interhospital spread is far more frequent within, rather than between, countries. Finally, we propose a value of 21 for the number of single nucleotide polymorphisms that optimizes the discrimination of hospital clusters and detail the international spread of the successful epidemic lineage, ST258/512.
Genomic and epidemiological analysis of carbapenem-resistant
Klebsiella pneumoniae
across Europe finds increased transmissibility of four clonal lineages, especially between hospitals within countries.
Publisher
Nature Publishing Group UK,Nature Publishing Group
Subject
/ Biomedical and Life Sciences
/ Carbapenem-Resistant Enterobacteriaceae - classification
/ Carbapenem-Resistant Enterobacteriaceae - genetics
/ Cross Infection - epidemiology
/ Cross Infection - transmission
/ Enterobacteriaceae Infections - epidemiology
/ Enterobacteriaceae Infections - transmission
/ Genomes
/ Humans
/ Polymorphism, Single Nucleotide
/ Single-nucleotide polymorphism
/ Virology
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