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Genomic characterization of highly pathogenic avian influenza A H5N1 virus newly emerged in dairy cattle
by
Gauger, Phillip C.
, Zhang, Jianqiang
, Plummer, Paul J.
, Saxena, Anugrah
, Burrough, Eric R.
, Mainenti, Marta
, Magstadt, Drew R.
, Siepker, Chris
, Gorden, Patrick J.
, Li, Ganwu
, Hu, Xiao
in
Animals
/ Avian flu
/ Bird migration
/ Birds - virology
/ Cattle
/ Cattle Diseases - virology
/ clade 2.3.4.4b
/ Dairy cattle
/ Emerging Seasonal and Pandemic Influenza Infections
/ genome sequence
/ Genome, Viral
/ Genomes
/ Genotype
/ H5N1
/ Highly pathogenic avian influenza (HPAI)
/ Humans
/ Influenza A Virus, H5N1 Subtype - classification
/ Influenza A Virus, H5N1 Subtype - genetics
/ Influenza A Virus, H5N1 Subtype - isolation & purification
/ Influenza A Virus, H5N1 Subtype - pathogenicity
/ Influenza in Birds - virology
/ Milk production
/ Mutation
/ Orthomyxoviridae Infections - veterinary
/ Orthomyxoviridae Infections - virology
/ Phylogenetics
/ Phylogeny
/ Public health
/ Reassortant Viruses - classification
/ Reassortant Viruses - genetics
/ Reassortant Viruses - isolation & purification
/ Reassortant Viruses - pathogenicity
/ reassortment events
/ Veterinary colleges
/ Veterinary medicine
/ Viral Proteins - genetics
/ Viruses
2024
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Genomic characterization of highly pathogenic avian influenza A H5N1 virus newly emerged in dairy cattle
by
Gauger, Phillip C.
, Zhang, Jianqiang
, Plummer, Paul J.
, Saxena, Anugrah
, Burrough, Eric R.
, Mainenti, Marta
, Magstadt, Drew R.
, Siepker, Chris
, Gorden, Patrick J.
, Li, Ganwu
, Hu, Xiao
in
Animals
/ Avian flu
/ Bird migration
/ Birds - virology
/ Cattle
/ Cattle Diseases - virology
/ clade 2.3.4.4b
/ Dairy cattle
/ Emerging Seasonal and Pandemic Influenza Infections
/ genome sequence
/ Genome, Viral
/ Genomes
/ Genotype
/ H5N1
/ Highly pathogenic avian influenza (HPAI)
/ Humans
/ Influenza A Virus, H5N1 Subtype - classification
/ Influenza A Virus, H5N1 Subtype - genetics
/ Influenza A Virus, H5N1 Subtype - isolation & purification
/ Influenza A Virus, H5N1 Subtype - pathogenicity
/ Influenza in Birds - virology
/ Milk production
/ Mutation
/ Orthomyxoviridae Infections - veterinary
/ Orthomyxoviridae Infections - virology
/ Phylogenetics
/ Phylogeny
/ Public health
/ Reassortant Viruses - classification
/ Reassortant Viruses - genetics
/ Reassortant Viruses - isolation & purification
/ Reassortant Viruses - pathogenicity
/ reassortment events
/ Veterinary colleges
/ Veterinary medicine
/ Viral Proteins - genetics
/ Viruses
2024
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Genomic characterization of highly pathogenic avian influenza A H5N1 virus newly emerged in dairy cattle
by
Gauger, Phillip C.
, Zhang, Jianqiang
, Plummer, Paul J.
, Saxena, Anugrah
, Burrough, Eric R.
, Mainenti, Marta
, Magstadt, Drew R.
, Siepker, Chris
, Gorden, Patrick J.
, Li, Ganwu
, Hu, Xiao
in
Animals
/ Avian flu
/ Bird migration
/ Birds - virology
/ Cattle
/ Cattle Diseases - virology
/ clade 2.3.4.4b
/ Dairy cattle
/ Emerging Seasonal and Pandemic Influenza Infections
/ genome sequence
/ Genome, Viral
/ Genomes
/ Genotype
/ H5N1
/ Highly pathogenic avian influenza (HPAI)
/ Humans
/ Influenza A Virus, H5N1 Subtype - classification
/ Influenza A Virus, H5N1 Subtype - genetics
/ Influenza A Virus, H5N1 Subtype - isolation & purification
/ Influenza A Virus, H5N1 Subtype - pathogenicity
/ Influenza in Birds - virology
/ Milk production
/ Mutation
/ Orthomyxoviridae Infections - veterinary
/ Orthomyxoviridae Infections - virology
/ Phylogenetics
/ Phylogeny
/ Public health
/ Reassortant Viruses - classification
/ Reassortant Viruses - genetics
/ Reassortant Viruses - isolation & purification
/ Reassortant Viruses - pathogenicity
/ reassortment events
/ Veterinary colleges
/ Veterinary medicine
/ Viral Proteins - genetics
/ Viruses
2024
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Genomic characterization of highly pathogenic avian influenza A H5N1 virus newly emerged in dairy cattle
Journal Article
Genomic characterization of highly pathogenic avian influenza A H5N1 virus newly emerged in dairy cattle
2024
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Overview
In March 2024, the emergence of highly pathogenic avian influenza (HPAI) A (H5N1) infections in dairy cattle was detected in the United Sates for the first time. We genetically characterize HPAI viruses from dairy cattle showing an abrupt drop in milk production, as well as from two cats, six wild birds, and one skunk. They share nearly identical genome sequences, forming a new genotype B3.13 within the 2.3.4.4b clade. B3.13 viruses underwent two reassortment events since 2023 and exhibit critical mutations in HA, M1, and NS genes but lack critical mutations in PB2 and PB1 genes, which enhance virulence or adaptation to mammals. The PB2 E627 K mutation in a human case associated with cattle underscores the potential for rapid evolution post infection, highlighting the need for continued surveillance to monitor public health threats.
Publisher
Taylor & Francis Ltd,Taylor & Francis,Taylor & Francis Group
Subject
/ Cattle
/ Emerging Seasonal and Pandemic Influenza Infections
/ Genomes
/ Genotype
/ H5N1
/ Highly pathogenic avian influenza (HPAI)
/ Humans
/ Influenza A Virus, H5N1 Subtype - classification
/ Influenza A Virus, H5N1 Subtype - genetics
/ Influenza A Virus, H5N1 Subtype - isolation & purification
/ Influenza A Virus, H5N1 Subtype - pathogenicity
/ Influenza in Birds - virology
/ Mutation
/ Orthomyxoviridae Infections - veterinary
/ Orthomyxoviridae Infections - virology
/ Reassortant Viruses - classification
/ Reassortant Viruses - genetics
/ Reassortant Viruses - isolation & purification
/ Reassortant Viruses - pathogenicity
/ Viruses
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