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Plastid ancestors lacked a complete Entner-Doudoroff pathway, limiting plants to glycolysis and the pentose phosphate pathway
by
Evans, Sonia E.
, Sethna, Nasha S.
, Phillips, Michael A.
, Franks, Anya E.
, Currie, Mark A.
, Bergman, Matthew E.
in
101/58
/ 14/19
/ 631/449/2669
/ 631/449/448/1374
/ 631/92/1643
/ 82/16
/ 82/80
/ Aldolase
/ Amino acids
/ Chain branching
/ Dehydration
/ E coli
/ Entner-Doudoroff pathway
/ Enzymes
/ Escherichia coli - genetics
/ Eukaryotes
/ Genes
/ Glucose - metabolism
/ Glyceraldehyde
/ Glycolysis
/ Humanities and Social Sciences
/ Hydro-Lyases - metabolism
/ multidisciplinary
/ Pentose
/ Pentose Phosphate Pathway
/ Plants - metabolism
/ Prokaryotes
/ Pyruvic Acid
/ Science
/ Science (multidisciplinary)
/ Substrate preferences
/ Substrate specificity
/ Substrates
2024
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Plastid ancestors lacked a complete Entner-Doudoroff pathway, limiting plants to glycolysis and the pentose phosphate pathway
by
Evans, Sonia E.
, Sethna, Nasha S.
, Phillips, Michael A.
, Franks, Anya E.
, Currie, Mark A.
, Bergman, Matthew E.
in
101/58
/ 14/19
/ 631/449/2669
/ 631/449/448/1374
/ 631/92/1643
/ 82/16
/ 82/80
/ Aldolase
/ Amino acids
/ Chain branching
/ Dehydration
/ E coli
/ Entner-Doudoroff pathway
/ Enzymes
/ Escherichia coli - genetics
/ Eukaryotes
/ Genes
/ Glucose - metabolism
/ Glyceraldehyde
/ Glycolysis
/ Humanities and Social Sciences
/ Hydro-Lyases - metabolism
/ multidisciplinary
/ Pentose
/ Pentose Phosphate Pathway
/ Plants - metabolism
/ Prokaryotes
/ Pyruvic Acid
/ Science
/ Science (multidisciplinary)
/ Substrate preferences
/ Substrate specificity
/ Substrates
2024
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Plastid ancestors lacked a complete Entner-Doudoroff pathway, limiting plants to glycolysis and the pentose phosphate pathway
by
Evans, Sonia E.
, Sethna, Nasha S.
, Phillips, Michael A.
, Franks, Anya E.
, Currie, Mark A.
, Bergman, Matthew E.
in
101/58
/ 14/19
/ 631/449/2669
/ 631/449/448/1374
/ 631/92/1643
/ 82/16
/ 82/80
/ Aldolase
/ Amino acids
/ Chain branching
/ Dehydration
/ E coli
/ Entner-Doudoroff pathway
/ Enzymes
/ Escherichia coli - genetics
/ Eukaryotes
/ Genes
/ Glucose - metabolism
/ Glyceraldehyde
/ Glycolysis
/ Humanities and Social Sciences
/ Hydro-Lyases - metabolism
/ multidisciplinary
/ Pentose
/ Pentose Phosphate Pathway
/ Plants - metabolism
/ Prokaryotes
/ Pyruvic Acid
/ Science
/ Science (multidisciplinary)
/ Substrate preferences
/ Substrate specificity
/ Substrates
2024
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Plastid ancestors lacked a complete Entner-Doudoroff pathway, limiting plants to glycolysis and the pentose phosphate pathway
Journal Article
Plastid ancestors lacked a complete Entner-Doudoroff pathway, limiting plants to glycolysis and the pentose phosphate pathway
2024
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Overview
The Entner–Doudoroff (ED) pathway provides an alternative to glycolysis. It converts 6-phosphogluconate (6-PG) to glyceraldehyde-3-phosphate and pyruvate in two steps consisting of a dehydratase (EDD) and an aldolase (EDA). Here, we investigate its distribution and significance in higher plants and determine the ED pathway is restricted to prokaryotes due to the absence of
EDD
genes in eukaryotes. EDDs share a common origin with dihydroxy-acid dehydratases (DHADs) of the branched chain amino acid pathway (BCAA). Each dehydratase features strict substrate specificity.
E. coli
EDD dehydrates 6-PG to 2-keto-3-deoxy-6-phosphogluconate, while DHAD only dehydrates substrates from the BCAA pathway. Structural modeling identifies two divergent domains which account for their non-overlapping substrate affinities. Coupled enzyme assays confirm only EDD participates in the ED pathway. Plastid ancestors lacked EDD but transferred metabolically promiscuous EDA, which explains the absence of the ED pathway from the Viridiplantae and sporadic persistence of
EDA
genes across the plant kingdom.
The Enter-Doudoroff (ED) pathway is an alternative to glycolysis present in some prokaryotes. Evans et al. show that its dehydratase enzyme, evolved from a branched chain amino acid pathway paralog, acquired a new function through mutations in its active site.
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