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The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting
by
Rand, Ulfert
, Caliskan, Neva
, Kibe, Anuja
, Zimmer, Matthias M.
, Cicin-Sain, Luka
, Smyth, Redmond P.
, Buck, Stefan
, Pekarek, Lukas
, Ye, Liqing
in
101/47
/ 13
/ 38
/ 45/90
/ 631/337/574
/ 631/45/500
/ 82/58
/ Antiviral drugs
/ COVID-19
/ Folding
/ Frameshifting, Ribosomal
/ Gene expression
/ Gene regulation
/ HEK293 Cells
/ Host-Pathogen Interactions
/ Humanities and Social Sciences
/ Humans
/ Life cycles
/ Life Sciences
/ Mechanical properties
/ Microbiology and Parasitology
/ multidisciplinary
/ Nucleic Acid Conformation
/ Protein Isoforms
/ Proteins
/ Proteome
/ Proteomes
/ Repressor Proteins - metabolism
/ Ribonucleic acid
/ RNA
/ RNA, Viral - genetics
/ RNA-Binding Proteins - metabolism
/ SARS-CoV-2 - genetics
/ SARS-CoV-2 - physiology
/ Science
/ Science (multidisciplinary)
/ Severe acute respiratory syndrome coronavirus 2
/ Transcription
/ Viral diseases
/ Virology
/ Virulence
/ Virus Replication
/ Viruses
/ Zinc
/ Zinc finger proteins
2021
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The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting
by
Rand, Ulfert
, Caliskan, Neva
, Kibe, Anuja
, Zimmer, Matthias M.
, Cicin-Sain, Luka
, Smyth, Redmond P.
, Buck, Stefan
, Pekarek, Lukas
, Ye, Liqing
in
101/47
/ 13
/ 38
/ 45/90
/ 631/337/574
/ 631/45/500
/ 82/58
/ Antiviral drugs
/ COVID-19
/ Folding
/ Frameshifting, Ribosomal
/ Gene expression
/ Gene regulation
/ HEK293 Cells
/ Host-Pathogen Interactions
/ Humanities and Social Sciences
/ Humans
/ Life cycles
/ Life Sciences
/ Mechanical properties
/ Microbiology and Parasitology
/ multidisciplinary
/ Nucleic Acid Conformation
/ Protein Isoforms
/ Proteins
/ Proteome
/ Proteomes
/ Repressor Proteins - metabolism
/ Ribonucleic acid
/ RNA
/ RNA, Viral - genetics
/ RNA-Binding Proteins - metabolism
/ SARS-CoV-2 - genetics
/ SARS-CoV-2 - physiology
/ Science
/ Science (multidisciplinary)
/ Severe acute respiratory syndrome coronavirus 2
/ Transcription
/ Viral diseases
/ Virology
/ Virulence
/ Virus Replication
/ Viruses
/ Zinc
/ Zinc finger proteins
2021
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The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting
by
Rand, Ulfert
, Caliskan, Neva
, Kibe, Anuja
, Zimmer, Matthias M.
, Cicin-Sain, Luka
, Smyth, Redmond P.
, Buck, Stefan
, Pekarek, Lukas
, Ye, Liqing
in
101/47
/ 13
/ 38
/ 45/90
/ 631/337/574
/ 631/45/500
/ 82/58
/ Antiviral drugs
/ COVID-19
/ Folding
/ Frameshifting, Ribosomal
/ Gene expression
/ Gene regulation
/ HEK293 Cells
/ Host-Pathogen Interactions
/ Humanities and Social Sciences
/ Humans
/ Life cycles
/ Life Sciences
/ Mechanical properties
/ Microbiology and Parasitology
/ multidisciplinary
/ Nucleic Acid Conformation
/ Protein Isoforms
/ Proteins
/ Proteome
/ Proteomes
/ Repressor Proteins - metabolism
/ Ribonucleic acid
/ RNA
/ RNA, Viral - genetics
/ RNA-Binding Proteins - metabolism
/ SARS-CoV-2 - genetics
/ SARS-CoV-2 - physiology
/ Science
/ Science (multidisciplinary)
/ Severe acute respiratory syndrome coronavirus 2
/ Transcription
/ Viral diseases
/ Virology
/ Virulence
/ Virus Replication
/ Viruses
/ Zinc
/ Zinc finger proteins
2021
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The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting
Journal Article
The short isoform of the host antiviral protein ZAP acts as an inhibitor of SARS-CoV-2 programmed ribosomal frameshifting
2021
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Overview
Programmed ribosomal frameshifting (PRF) is a fundamental gene expression event in many viruses, including SARS-CoV-2. It allows production of essential viral, structural and replicative enzymes that are encoded in an alternative reading frame. Despite the importance of PRF for the viral life cycle, it is still largely unknown how and to what extent cellular factors alter mechanical properties of frameshift elements and thereby impact virulence. This prompted us to comprehensively dissect the interplay between the SARS-CoV-2 frameshift element and the host proteome. We reveal that the short isoform of the zinc-finger antiviral protein (ZAP-S) is a direct regulator of PRF in SARS-CoV-2 infected cells. ZAP-S overexpression strongly impairs frameshifting and inhibits viral replication. Using in vitro ensemble and single-molecule techniques, we further demonstrate that ZAP-S directly interacts with the SARS-CoV-2 RNA and interferes with the folding of the frameshift RNA element. Together, these data identify ZAP-S as a host-encoded inhibitor of SARS-CoV-2 frameshifting and expand our understanding of RNA-based gene regulation.
Programmed ribosomal frameshifting (PRF) occurs in many viruses including SARS-CoV-2 to allow the translation of multiple proteins from a single transcript. Here, the authors identify the human short isoform of the zinc-finger antiviral protein (ZAP-S) as a direct regulator of PRF in SARS-CoV-2 that severely impairs SARS-CoV-2 frameshifting in cells and directly interacts with the SARS-CoV-2 RNA; interfering with the folding of the frameshift RNA element.
Publisher
Nature Publishing Group UK,Nature Publishing Group,Nature Portfolio
Subject
/ 13
/ 38
/ 45/90
/ 82/58
/ COVID-19
/ Folding
/ Humanities and Social Sciences
/ Humans
/ Microbiology and Parasitology
/ Proteins
/ Proteome
/ Repressor Proteins - metabolism
/ RNA
/ RNA-Binding Proteins - metabolism
/ Science
/ Severe acute respiratory syndrome coronavirus 2
/ Virology
/ Viruses
/ Zinc
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