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Journal Article
Review of Clinical Next-Generation Sequencing
2017
Overview
- Next-generation sequencing (NGS) is a technology being used by many laboratories to test for inherited disorders and tumor mutations. This technology is new for many practicing pathologists, who may not be familiar with the uses, methodology, and limitations of NGS.
- To familiarize pathologists with several aspects of NGS, including current and expanding uses; methodology including wet bench aspects, bioinformatics, and interpretation; validation and proficiency; limitations; and issues related to the integration of NGS data into patient care.
- The review is based on peer-reviewed literature and personal experience using NGS in a clinical setting at a major academic center.
- The clinical applications of NGS will increase as the technology, bioinformatics, and resources evolve to address the limitations and improve quality of results. The challenge for clinical laboratories is to ensure testing is clinically relevant, cost-effective, and can be integrated into clinical care.
Publisher
College of American Pathologists
Subject
/ Cancer
/ Computational Biology - economics
/ Computational Biology - instrumentation
/ Computational Biology - trends
/ Disease
/ DNA
/ DNA Mutational Analysis - economics
/ DNA Mutational Analysis - instrumentation
/ DNA Mutational Analysis - standards
/ DNA Mutational Analysis - trends
/ Genes
/ Genetic Diseases, Inborn - diagnosis
/ Genetic Diseases, Inborn - genetics
/ Genetic Testing - instrumentation
/ Genomes
/ Genomics
/ High-Throughput Nucleotide Sequencing - economics
/ High-Throughput Nucleotide Sequencing - instrumentation
/ High-Throughput Nucleotide Sequencing - standards
/ High-Throughput Nucleotide Sequencing - trends
/ Humans
/ Laboratory Proficiency Testing
/ Methods
/ Molecular diagnostic techniques
/ Mutation
/ Oncology
