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Diversity of an uncommon elastic hypersaline microbial mat along a small-scale transect

by Cifuentes Camargo, Julián Felipe , Figueroa, Mario , Esquivel-Hernandez, Diego A. , Velez, Patricia , Madrigal-Trejo, David , Espinosa-Asuar, Laura , Sánchez-Pérez, Jazmin , Monroy-Guzmán, Camila , Kalambokidis, Maria , Ramirez-Barahona, Santiago , Souza, Valeria , Viladomat Jasso, Mariette , Escalante, Ana E. , Eguiarte, Luis E. , Gasca-Pineda, Jaime , Navarro-Miranda, Marisol , Buenrostro Muñoz, Jhoselinne , Villar, Juan , Martinez-Cardenas, Anahi

in Analysis / Biodiversity / Biogeography / Bioinformatics / Biosphere / Classification / Cuatro Ciénegas Coahuila / DNA, Ribosomal / Ecology / Environment / Flat panel displays / Geographical distribution / Metabolites / Metabolome analysis / Mexico / Microbial communities / Microbiology / Phylogenetic diversity / Phylogenetics / Phylogeny / Rare biosphere / rRNA 16S / Salinity / Seasons / Taxonomy

2022

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2022

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2022

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Journal Article

Diversity of an uncommon elastic hypersaline microbial mat along a small-scale transect

Cifuentes Camargo, Julián Felipe,

Figueroa, Mario,

Esquivel-Hernandez, Diego A.,

Velez, Patricia,

Madrigal-Trejo, David,

Espinosa-Asuar, Laura,

Sánchez-Pérez, Jazmin,

Monroy-Guzmán, Camila,

Kalambokidis, Maria,

Ramirez-Barahona, Santiago,

Souza, Valeria,

Viladomat Jasso, Mariette,

Escalante, Ana E.,

Eguiarte, Luis E.,

Gasca-Pineda, Jaime,

Navarro-Miranda, Marisol,

Buenrostro Muñoz, Jhoselinne,

Villar, Juan,

Martinez-Cardenas, Anahi

2022

Overview

We evaluated the microbial diversity and metabolome profile of an uncommon hypersaline elastic microbial mat from Cuatro Ciénegas Basin (CCB) in the Chihuahuan Desert of Coahuila, México. We collected ten samples on a small scale transect (1.5-m) and described its microbial diversity through NGS-based ITS and 16S rDNA gene sequencing. A very low number of taxa comprised a considerable proportion of the mat and were shared across all sampling points, whereas the rare biosphere was more phylogenetically diverse (Faith’s Phylogenetic Diversity (FPD) index) and phylogenetically disperse (using a null model distribution of Phylogenetic Species Clustering (nmdPSC)) than the abundant (high read count) taxa for both analyzed libraries. We also found a distinctive metabolome profile for each sample and were able to tentatively annotate several classes of compounds with relevant biological properties.

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Publisher

PeerJ. Ltd,PeerJ, Inc,PeerJ Inc

Subject

/ Cuatro Ciénegas Coahuila