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Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities
by
Likens, Johnathan
, Tallent, Sandra
, Bell, Jon W.
, Rabideau, Patricia
, Haendiges, Julie
, Haynes, Stephanie
, Brown, Eric W.
, Wilson, Steven
in
Animal Feed - microbiology
/ Animals
/ Antimicrobial agents
/ Biology and Life Sciences
/ Contamination
/ Datasets
/ Distribution
/ Drug resistance
/ Earth Sciences
/ Engineering and Technology
/ Fish
/ Fish meal
/ Fishes - microbiology
/ Food Contamination - analysis
/ Food Microbiology
/ Genetic diversity
/ Genomes
/ Genomics
/ Genomics - methods
/ High-Throughput Nucleotide Sequencing
/ Medicine and Health Sciences
/ Metadata
/ Next-generation sequencing
/ Pathogens
/ Production processes
/ Quality control
/ Research and Analysis Methods
/ Salmonella
/ Salmonella - classification
/ Salmonella - genetics
/ Salmonella - isolation & purification
/ Seafood
/ Storage facilities
/ Testing
2025
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Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities
by
Likens, Johnathan
, Tallent, Sandra
, Bell, Jon W.
, Rabideau, Patricia
, Haendiges, Julie
, Haynes, Stephanie
, Brown, Eric W.
, Wilson, Steven
in
Animal Feed - microbiology
/ Animals
/ Antimicrobial agents
/ Biology and Life Sciences
/ Contamination
/ Datasets
/ Distribution
/ Drug resistance
/ Earth Sciences
/ Engineering and Technology
/ Fish
/ Fish meal
/ Fishes - microbiology
/ Food Contamination - analysis
/ Food Microbiology
/ Genetic diversity
/ Genomes
/ Genomics
/ Genomics - methods
/ High-Throughput Nucleotide Sequencing
/ Medicine and Health Sciences
/ Metadata
/ Next-generation sequencing
/ Pathogens
/ Production processes
/ Quality control
/ Research and Analysis Methods
/ Salmonella
/ Salmonella - classification
/ Salmonella - genetics
/ Salmonella - isolation & purification
/ Seafood
/ Storage facilities
/ Testing
2025
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Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities
by
Likens, Johnathan
, Tallent, Sandra
, Bell, Jon W.
, Rabideau, Patricia
, Haendiges, Julie
, Haynes, Stephanie
, Brown, Eric W.
, Wilson, Steven
in
Animal Feed - microbiology
/ Animals
/ Antimicrobial agents
/ Biology and Life Sciences
/ Contamination
/ Datasets
/ Distribution
/ Drug resistance
/ Earth Sciences
/ Engineering and Technology
/ Fish
/ Fish meal
/ Fishes - microbiology
/ Food Contamination - analysis
/ Food Microbiology
/ Genetic diversity
/ Genomes
/ Genomics
/ Genomics - methods
/ High-Throughput Nucleotide Sequencing
/ Medicine and Health Sciences
/ Metadata
/ Next-generation sequencing
/ Pathogens
/ Production processes
/ Quality control
/ Research and Analysis Methods
/ Salmonella
/ Salmonella - classification
/ Salmonella - genetics
/ Salmonella - isolation & purification
/ Seafood
/ Storage facilities
/ Testing
2025
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Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities
Journal Article
Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities
2025
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Overview
This study evaluates Salmonella contamination in feed mill production facilities over a 12-year period, analyzing collection events from 12 facilities predominantly located in the southeastern United States. The genomic data reveals a historical contamination rate, with 20% of collection events testing positive for Salmonella . Utilizing next generation sequencing this study evaluated the genetic diversity in the different facilities to determine whether the Salmonella serovars that were found are transient or resident. Salmonella serovars Montevideo, Ruiru, and Senftenberg were frequently detected, with Ruiru showing a particularly high predominance across multiple facilities, suggesting possible common sources of contamination including regional fishing waters and shared additives. The study also highlights the role of transportation and storage methods as a possible cause of cross-contamination. Future research should focus on identifying specific contamination sources and optimizing control measures to reduce Salmonella risks in fish meal production.
Publisher
Public Library of Science,Public Library of Science (PLoS)
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