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Identification and monitoring of mutations in circulating cell-free tumor DNA in hepatocellular carcinoma treated with lenvatinib
by
Uchikawa, Shinsuke
, Miki, Daiki
, Fujino, Hatsue
, Tsuge, Masataka
, Imamura, Michio
, Nakahara, Takashi
, Hayes, C. Nelson
, Ono, Atsushi
, Aikata, Hiroshi
, Chayama, Kazuaki
, Kodama, Kenichiro
, Murakami, Eisuke
, Teraoka, Yuji
, Okamoto, Wataru
, Kawaoka, Tomokazu
, Fujii, Yasutoshi
, Yamauchi, Masami
in
Analysis
/ Apoptosis
/ Bioinformatics
/ Biomarkers
/ Biomedical and Life Sciences
/ Biomedicine
/ Biopsy
/ Cancer
/ Cancer Research
/ Cancer therapies
/ Care and treatment
/ Cell cycle
/ Circulating tumor DNA
/ Development and progression
/ DNA
/ Drug dosages
/ Ethylenediaminetetraacetic acid
/ Genes
/ Genetic aspects
/ Genetic research
/ Glycoproteins
/ Hepatocellular carcinoma
/ Hepatoma
/ Immunology
/ Kinases
/ Laboratories
/ Lenvatinib
/ Liver cancer
/ Mutation
/ Oncology
/ Patients
/ Plasma
/ Prognosis
/ Statistical analysis
/ Tumor proteins
/ Tumors
2021
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Identification and monitoring of mutations in circulating cell-free tumor DNA in hepatocellular carcinoma treated with lenvatinib
by
Uchikawa, Shinsuke
, Miki, Daiki
, Fujino, Hatsue
, Tsuge, Masataka
, Imamura, Michio
, Nakahara, Takashi
, Hayes, C. Nelson
, Ono, Atsushi
, Aikata, Hiroshi
, Chayama, Kazuaki
, Kodama, Kenichiro
, Murakami, Eisuke
, Teraoka, Yuji
, Okamoto, Wataru
, Kawaoka, Tomokazu
, Fujii, Yasutoshi
, Yamauchi, Masami
in
Analysis
/ Apoptosis
/ Bioinformatics
/ Biomarkers
/ Biomedical and Life Sciences
/ Biomedicine
/ Biopsy
/ Cancer
/ Cancer Research
/ Cancer therapies
/ Care and treatment
/ Cell cycle
/ Circulating tumor DNA
/ Development and progression
/ DNA
/ Drug dosages
/ Ethylenediaminetetraacetic acid
/ Genes
/ Genetic aspects
/ Genetic research
/ Glycoproteins
/ Hepatocellular carcinoma
/ Hepatoma
/ Immunology
/ Kinases
/ Laboratories
/ Lenvatinib
/ Liver cancer
/ Mutation
/ Oncology
/ Patients
/ Plasma
/ Prognosis
/ Statistical analysis
/ Tumor proteins
/ Tumors
2021
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Identification and monitoring of mutations in circulating cell-free tumor DNA in hepatocellular carcinoma treated with lenvatinib
by
Uchikawa, Shinsuke
, Miki, Daiki
, Fujino, Hatsue
, Tsuge, Masataka
, Imamura, Michio
, Nakahara, Takashi
, Hayes, C. Nelson
, Ono, Atsushi
, Aikata, Hiroshi
, Chayama, Kazuaki
, Kodama, Kenichiro
, Murakami, Eisuke
, Teraoka, Yuji
, Okamoto, Wataru
, Kawaoka, Tomokazu
, Fujii, Yasutoshi
, Yamauchi, Masami
in
Analysis
/ Apoptosis
/ Bioinformatics
/ Biomarkers
/ Biomedical and Life Sciences
/ Biomedicine
/ Biopsy
/ Cancer
/ Cancer Research
/ Cancer therapies
/ Care and treatment
/ Cell cycle
/ Circulating tumor DNA
/ Development and progression
/ DNA
/ Drug dosages
/ Ethylenediaminetetraacetic acid
/ Genes
/ Genetic aspects
/ Genetic research
/ Glycoproteins
/ Hepatocellular carcinoma
/ Hepatoma
/ Immunology
/ Kinases
/ Laboratories
/ Lenvatinib
/ Liver cancer
/ Mutation
/ Oncology
/ Patients
/ Plasma
/ Prognosis
/ Statistical analysis
/ Tumor proteins
/ Tumors
2021
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Identification and monitoring of mutations in circulating cell-free tumor DNA in hepatocellular carcinoma treated with lenvatinib
Journal Article
Identification and monitoring of mutations in circulating cell-free tumor DNA in hepatocellular carcinoma treated with lenvatinib
2021
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Overview
Background
There has been a recent surge in interest in predicting biological effects associated with genomic alterations in order to implement personalized cancer treatment strategies. However, no reports have yet evaluated the utility of profiling blood-based circulating tumor DNA (ctDNA) in hepatocellular carcinoma (HCC) patients treated with lenvatinib (LEN).
Method
We retrospectively performed ctDNA next-generation sequencing (NGS) analysis in 24 patients with advanced HCC at baseline and 4 weeks after initiation of LEN. Association of the changes in variant allele frequencies (VAFs) during treatment and clinical outcome were evaluated.
Results
In total, 131 single nucleotide variants, 17 indels, and 23 copy number variations were detected as somatic alterations in 28, 6, and 12 genes, respectively in 23 of 24 patients. The most frequently altered genes were
TP53
(54%),
CTNNB1
(42%),
TERT
(42%),
ATM
(25%), and
ARID1A
(13%). The reduction in the mean frequency of variants (VAF
mean
) following 4 weeks of LEN treatment was associated with longer progression-free survival. The specificity and sensitivity of the reduction of VAF
mean
for predicting partial response were 0.67 and 1.0, respectively, which were higher than those of serum α-fetoprotein level (0.10 and 0.93, respectively). No association between the mutation status at baseline and the effectiveness of LEN was observed.
Conclusion
Our study demonstrated that somatic alterations could be detected in the majority of advanced HCC patients by ctDNA profiling and that ctDNA-kinetics during LEN treatment was a useful marker of disease progression. These results suggest that ctDNA profiling is a promising method that provides valuable information in clinical practice.
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