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A reinforcing HNF4–SMAD4 feed-forward module stabilizes enterocyte identity
by
Verzi, Michael P.
, Fullem, Robert L.
, Luo, Shirley
, Chen, Lei
, Vasoya, Roshan P.
, Parthasarathy, Aditya
, Perekatt, Ansu O.
, Toke, Natalie H.
in
13/106
/ 13/31
/ 13/51
/ 14/19
/ 14/63
/ 38/39
/ 38/77
/ 38/90
/ 38/91
/ 45/15
/ 631/208/200
/ 64/110
/ 64/60
/ 692/699/1503
/ 82/29
/ Agriculture
/ Animal Genetics and Genomics
/ Animals
/ Binding sites
/ Binding Sites - genetics
/ Bioinformatics
/ Biomedical and Life Sciences
/ Biomedicine
/ Bone morphogenetic proteins
/ Caco-2 Cells
/ Cancer Research
/ Cell Differentiation - genetics
/ Cell Differentiation - physiology
/ Chromatin
/ Deoxyribonucleic acid
/ Developmental genetics
/ Differentiation
/ Disruption
/ DNA
/ DNA binding proteins
/ Enhancer Elements, Genetic
/ Enterocytes - cytology
/ Enterocytes - metabolism
/ Epithelium
/ Gene expression
/ Gene Function
/ Genetic aspects
/ Genomes
/ Genomics
/ Hepatocyte nuclear factor 4
/ Hepatocyte Nuclear Factor 4 - deficiency
/ Hepatocyte Nuclear Factor 4 - genetics
/ Hepatocyte Nuclear Factor 4 - metabolism
/ Homeostasis
/ Human Genetics
/ Humans
/ Intestine
/ Intestines
/ Legal fees
/ Letter
/ Mice
/ Mice, Knockout
/ Modules
/ Ontology
/ Physiological aspects
/ Plastic foam
/ Regulatory sequences
/ Signal Transduction
/ Signaling
/ Smad protein
/ Smad4 protein
/ Smad4 Protein - deficiency
/ Smad4 Protein - genetics
/ Smad4 Protein - metabolism
/ Stem cells
/ Transcription factors
/ Transforming growth factors
2019
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A reinforcing HNF4–SMAD4 feed-forward module stabilizes enterocyte identity
by
Verzi, Michael P.
, Fullem, Robert L.
, Luo, Shirley
, Chen, Lei
, Vasoya, Roshan P.
, Parthasarathy, Aditya
, Perekatt, Ansu O.
, Toke, Natalie H.
in
13/106
/ 13/31
/ 13/51
/ 14/19
/ 14/63
/ 38/39
/ 38/77
/ 38/90
/ 38/91
/ 45/15
/ 631/208/200
/ 64/110
/ 64/60
/ 692/699/1503
/ 82/29
/ Agriculture
/ Animal Genetics and Genomics
/ Animals
/ Binding sites
/ Binding Sites - genetics
/ Bioinformatics
/ Biomedical and Life Sciences
/ Biomedicine
/ Bone morphogenetic proteins
/ Caco-2 Cells
/ Cancer Research
/ Cell Differentiation - genetics
/ Cell Differentiation - physiology
/ Chromatin
/ Deoxyribonucleic acid
/ Developmental genetics
/ Differentiation
/ Disruption
/ DNA
/ DNA binding proteins
/ Enhancer Elements, Genetic
/ Enterocytes - cytology
/ Enterocytes - metabolism
/ Epithelium
/ Gene expression
/ Gene Function
/ Genetic aspects
/ Genomes
/ Genomics
/ Hepatocyte nuclear factor 4
/ Hepatocyte Nuclear Factor 4 - deficiency
/ Hepatocyte Nuclear Factor 4 - genetics
/ Hepatocyte Nuclear Factor 4 - metabolism
/ Homeostasis
/ Human Genetics
/ Humans
/ Intestine
/ Intestines
/ Legal fees
/ Letter
/ Mice
/ Mice, Knockout
/ Modules
/ Ontology
/ Physiological aspects
/ Plastic foam
/ Regulatory sequences
/ Signal Transduction
/ Signaling
/ Smad protein
/ Smad4 protein
/ Smad4 Protein - deficiency
/ Smad4 Protein - genetics
/ Smad4 Protein - metabolism
/ Stem cells
/ Transcription factors
/ Transforming growth factors
2019
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A reinforcing HNF4–SMAD4 feed-forward module stabilizes enterocyte identity
by
Verzi, Michael P.
, Fullem, Robert L.
, Luo, Shirley
, Chen, Lei
, Vasoya, Roshan P.
, Parthasarathy, Aditya
, Perekatt, Ansu O.
, Toke, Natalie H.
in
13/106
/ 13/31
/ 13/51
/ 14/19
/ 14/63
/ 38/39
/ 38/77
/ 38/90
/ 38/91
/ 45/15
/ 631/208/200
/ 64/110
/ 64/60
/ 692/699/1503
/ 82/29
/ Agriculture
/ Animal Genetics and Genomics
/ Animals
/ Binding sites
/ Binding Sites - genetics
/ Bioinformatics
/ Biomedical and Life Sciences
/ Biomedicine
/ Bone morphogenetic proteins
/ Caco-2 Cells
/ Cancer Research
/ Cell Differentiation - genetics
/ Cell Differentiation - physiology
/ Chromatin
/ Deoxyribonucleic acid
/ Developmental genetics
/ Differentiation
/ Disruption
/ DNA
/ DNA binding proteins
/ Enhancer Elements, Genetic
/ Enterocytes - cytology
/ Enterocytes - metabolism
/ Epithelium
/ Gene expression
/ Gene Function
/ Genetic aspects
/ Genomes
/ Genomics
/ Hepatocyte nuclear factor 4
/ Hepatocyte Nuclear Factor 4 - deficiency
/ Hepatocyte Nuclear Factor 4 - genetics
/ Hepatocyte Nuclear Factor 4 - metabolism
/ Homeostasis
/ Human Genetics
/ Humans
/ Intestine
/ Intestines
/ Legal fees
/ Letter
/ Mice
/ Mice, Knockout
/ Modules
/ Ontology
/ Physiological aspects
/ Plastic foam
/ Regulatory sequences
/ Signal Transduction
/ Signaling
/ Smad protein
/ Smad4 protein
/ Smad4 Protein - deficiency
/ Smad4 Protein - genetics
/ Smad4 Protein - metabolism
/ Stem cells
/ Transcription factors
/ Transforming growth factors
2019
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A reinforcing HNF4–SMAD4 feed-forward module stabilizes enterocyte identity
Journal Article
A reinforcing HNF4–SMAD4 feed-forward module stabilizes enterocyte identity
2019
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Overview
BMP/SMAD signaling is a crucial regulator of intestinal differentiation
1
–
4
. However, the molecular underpinnings of the BMP pathway in this context are unknown. Here, we characterize the mechanism by which BMP/SMAD signaling drives enterocyte differentiation. We establish that the transcription factor HNF4A acts redundantly with an intestine-restricted HNF4 paralog, HNF4G, to activate enhancer chromatin and upregulate the majority of transcripts enriched in the differentiated epithelium; cells fail to differentiate on double knockout of both HNF4 paralogs. Furthermore, we show that SMAD4 and HNF4 function via a reinforcing feed-forward loop, activating each other’s expression and co-binding to regulatory elements of differentiation genes. This feed-forward regulatory module promotes and stabilizes enterocyte cell identity; disruption of the HNF4–SMAD4 module results in loss of enterocyte fate in favor of progenitor and secretory cell lineages. This intersection of signaling and transcriptional control provides a framework to understand regenerative tissue homeostasis, particularly in tissues with inherent cellular plasticity
5
.
The authors show that the transcription factors HNF4A and HNF4G regulate the transcriptome of the intestinal epithelium. HNF4 factors cooperate with BMP/SMAD signaling to promote enterocyte identity.
Publisher
Nature Publishing Group US,Nature Publishing Group
Subject
/ 13/31
/ 13/51
/ 14/19
/ 14/63
/ 38/39
/ 38/77
/ 38/90
/ 38/91
/ 45/15
/ 64/110
/ 64/60
/ 82/29
/ Animal Genetics and Genomics
/ Animals
/ Biomedical and Life Sciences
/ Cell Differentiation - genetics
/ Cell Differentiation - physiology
/ DNA
/ Genomes
/ Genomics
/ Hepatocyte Nuclear Factor 4 - deficiency
/ Hepatocyte Nuclear Factor 4 - genetics
/ Hepatocyte Nuclear Factor 4 - metabolism
/ Humans
/ Letter
/ Mice
/ Modules
/ Ontology
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