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Challenges and emerging directions in single-cell analysis

by Fan, Guoping , Quackenbush, John , Shivdasani, Ramesh , Irizarry, Rafael , Yuan, Guo-Cheng , Orkin, Stuart , Schroeder, Timm , Kim, Junhyong , Kharchenko, Peter , Saadatpour, Assieh , Elowitz, Michael , Tirosh, Itay , Cai, Long , Enver, Tariq , Guo, Guoji

in analytical methods / Animal Genetics and Genomics / Animals / Bias / Bioinformatics / Biology / Biomedical and Life Sciences / cell biology / Cell cycle / Cell Lineage / Cell State / Cellular Heterogeneity / Common Myeloid Progenitor / Computer applications / CRISPR / Deoxyribonucleic acid / DNA / Evolutionary Biology / Gene expression / Gene Expression Profiling - methods / Genomes / Genomics / Human Genetics / Humans / Hybridization Chain Reaction / Life Sciences / Mammals / Microbial Genetics and Genomics / Open Letter / Optical Imaging - methods / Plant Genetics and Genomics / Similar Cell Type / Single-Cell Analysis - methods / Stem cells / tissues

2017

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Challenges and emerging directions in single-cell analysis

2017

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Challenges and emerging directions in single-cell analysis

2017

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Journal Article

Challenges and emerging directions in single-cell analysis

Fan, Guoping,

Quackenbush, John,

Shivdasani, Ramesh,

Irizarry, Rafael,

Yuan, Guo-Cheng,

Orkin, Stuart,

Schroeder, Timm,

Kim, Junhyong,

Kharchenko, Peter,

Saadatpour, Assieh,

Elowitz, Michael,

Tirosh, Itay,

Cai, Long,

Enver, Tariq,

Guo, Guoji

2017

Overview

Single-cell analysis is a rapidly evolving approach to characterize genome-scale molecular information at the individual cell level. Development of single-cell technologies and computational methods has enabled systematic investigation of cellular heterogeneity in a wide range of tissues and cell populations, yielding fresh insights into the composition, dynamics, and regulatory mechanisms of cell states in development and disease. Despite substantial advances, significant challenges remain in the analysis, integration, and interpretation of single-cell omics data. Here, we discuss the state of the field and recent advances and look to future opportunities.

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Publisher

BioMed Central,Springer Nature B.V,BMC

Subject

analytical methods

/ Animal Genetics and Genomics

/ Animals

/ Bias

/ Bioinformatics

/ Biology

/ Biomedical and Life Sciences