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The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA
by
Tkačik, Gašper
, Little, Shawn C.
, Kneeland, Thomas B.
, Wieschaus, Eric F.
, Gregor, Thomas
in
Animals
/ Bicoid protein
/ Biodegradation
/ Biophysics/Experimental Biophysical Methods
/ Biophysics/Theory and Simulation
/ Body Patterning - physiology
/ Cell Biology/Developmental Molecular Mechanisms
/ Cell fate
/ Computer Simulation
/ Cortex
/ Cytogenetics
/ Data processing
/ Developmental Biology/Developmental Molecular Mechanisms
/ Developmental Biology/Embryology
/ Developmental Biology/Morphogenesis and Cell Biology
/ Developmental Biology/Pattern Formation
/ Developmental stages
/ Diffusion
/ Drosophila
/ Drosophila - embryology
/ Drosophila Proteins
/ Embryos
/ Fertilization
/ Fluorescence in situ hybridization
/ Genetic aspects
/ Green Fluorescent Proteins - metabolism
/ Homeodomain Proteins - metabolism
/ Image Processing, Computer-Assisted
/ In Situ Hybridization, Fluorescence - methods
/ Mathematical models
/ Messenger RNA
/ Metazoa
/ Microscopy
/ Models, Biological
/ Molecular Biology/mRNA Transport and Localization
/ Molecular modelling
/ Morphogenesis
/ mRNA
/ Pattern formation
/ Properties
/ Protein biosynthesis
/ Protein synthesis
/ Protein transport
/ Protein Transport - physiology
/ Proteins
/ RNA, Messenger - metabolism
/ Spatial distribution
/ Trans-Activators - metabolism
/ Translocation
2011
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The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA
by
Tkačik, Gašper
, Little, Shawn C.
, Kneeland, Thomas B.
, Wieschaus, Eric F.
, Gregor, Thomas
in
Animals
/ Bicoid protein
/ Biodegradation
/ Biophysics/Experimental Biophysical Methods
/ Biophysics/Theory and Simulation
/ Body Patterning - physiology
/ Cell Biology/Developmental Molecular Mechanisms
/ Cell fate
/ Computer Simulation
/ Cortex
/ Cytogenetics
/ Data processing
/ Developmental Biology/Developmental Molecular Mechanisms
/ Developmental Biology/Embryology
/ Developmental Biology/Morphogenesis and Cell Biology
/ Developmental Biology/Pattern Formation
/ Developmental stages
/ Diffusion
/ Drosophila
/ Drosophila - embryology
/ Drosophila Proteins
/ Embryos
/ Fertilization
/ Fluorescence in situ hybridization
/ Genetic aspects
/ Green Fluorescent Proteins - metabolism
/ Homeodomain Proteins - metabolism
/ Image Processing, Computer-Assisted
/ In Situ Hybridization, Fluorescence - methods
/ Mathematical models
/ Messenger RNA
/ Metazoa
/ Microscopy
/ Models, Biological
/ Molecular Biology/mRNA Transport and Localization
/ Molecular modelling
/ Morphogenesis
/ mRNA
/ Pattern formation
/ Properties
/ Protein biosynthesis
/ Protein synthesis
/ Protein transport
/ Protein Transport - physiology
/ Proteins
/ RNA, Messenger - metabolism
/ Spatial distribution
/ Trans-Activators - metabolism
/ Translocation
2011
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The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA
by
Tkačik, Gašper
, Little, Shawn C.
, Kneeland, Thomas B.
, Wieschaus, Eric F.
, Gregor, Thomas
in
Animals
/ Bicoid protein
/ Biodegradation
/ Biophysics/Experimental Biophysical Methods
/ Biophysics/Theory and Simulation
/ Body Patterning - physiology
/ Cell Biology/Developmental Molecular Mechanisms
/ Cell fate
/ Computer Simulation
/ Cortex
/ Cytogenetics
/ Data processing
/ Developmental Biology/Developmental Molecular Mechanisms
/ Developmental Biology/Embryology
/ Developmental Biology/Morphogenesis and Cell Biology
/ Developmental Biology/Pattern Formation
/ Developmental stages
/ Diffusion
/ Drosophila
/ Drosophila - embryology
/ Drosophila Proteins
/ Embryos
/ Fertilization
/ Fluorescence in situ hybridization
/ Genetic aspects
/ Green Fluorescent Proteins - metabolism
/ Homeodomain Proteins - metabolism
/ Image Processing, Computer-Assisted
/ In Situ Hybridization, Fluorescence - methods
/ Mathematical models
/ Messenger RNA
/ Metazoa
/ Microscopy
/ Models, Biological
/ Molecular Biology/mRNA Transport and Localization
/ Molecular modelling
/ Morphogenesis
/ mRNA
/ Pattern formation
/ Properties
/ Protein biosynthesis
/ Protein synthesis
/ Protein transport
/ Protein Transport - physiology
/ Proteins
/ RNA, Messenger - metabolism
/ Spatial distribution
/ Trans-Activators - metabolism
/ Translocation
2011
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The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA
Journal Article
The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA
2011
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Overview
The Bicoid morphogen gradient directs the patterning of cell fates along the anterior-posterior axis of the syncytial Drosophila embryo and serves as a paradigm of morphogen-mediated patterning. The simplest models of gradient formation rely on constant protein synthesis and diffusion from anteriorly localized source mRNA, coupled with uniform protein degradation. However, currently such models cannot account for all known gradient characteristics. Recent work has proposed that bicoid mRNA spatial distribution is sufficient to produce the observed protein gradient, minimizing the role of protein transport. Here, we adapt a novel method of fluorescent in situ hybridization to quantify the global spatio-temporal dynamics of bicoid mRNA particles. We determine that >90% of all bicoid mRNA is continuously present within the anterior 20% of the embryo. bicoid mRNA distribution along the body axis remains nearly unchanged despite dynamic mRNA translocation from the embryo core to the cortex. To evaluate the impact of mRNA distribution on protein gradient dynamics, we provide detailed quantitative measurements of nuclear Bicoid levels during the formation of the protein gradient. We find that gradient establishment begins 45 minutes after fertilization and that the gradient requires about 50 minutes to reach peak levels. In numerical simulations of gradient formation, we find that incorporating the actual bicoid mRNA distribution yields a closer prediction of the observed protein dynamics compared to modeling protein production from a point source at the anterior pole. We conclude that the spatial distribution of bicoid mRNA contributes to, but cannot account for, protein gradient formation, and therefore that protein movement, either active or passive, is required for gradient formation.
Publisher
Public Library of Science,Public Library of Science (PLoS)
Subject
/ Biophysics/Experimental Biophysical Methods
/ Biophysics/Theory and Simulation
/ Body Patterning - physiology
/ Cell Biology/Developmental Molecular Mechanisms
/ Cortex
/ Developmental Biology/Developmental Molecular Mechanisms
/ Developmental Biology/Embryology
/ Developmental Biology/Morphogenesis and Cell Biology
/ Developmental Biology/Pattern Formation
/ Embryos
/ Fluorescence in situ hybridization
/ Green Fluorescent Proteins - metabolism
/ Homeodomain Proteins - metabolism
/ Image Processing, Computer-Assisted
/ In Situ Hybridization, Fluorescence - methods
/ Metazoa
/ Molecular Biology/mRNA Transport and Localization
/ mRNA
/ Protein Transport - physiology
/ Proteins
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