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high-quality catalog of the Drosophila melanogaster proteome
by
Baetschmann, H
, Loevenich, S
, Panse, C
, Deutsch, E.W
, Brunner, E
, Ahrens, C.H
, Lichtenberg, U. de
, Rinner, O
, Potthast, F
, Mohanty, S
in
Agriculture
/ Amino Acid Sequence
/ Animals
/ Biochemistry
/ Bioinformatics
/ Biomedical Engineering/Biotechnology
/ Biomedicine
/ Biotechnology
/ chemistry
/ Data collection
/ Databases, Protein
/ Drosophila
/ Drosophila melanogaster
/ Drosophila melanogaster - chemistry
/ Drosophila melanogaster - genetics
/ Drosophila Proteins
/ Drosophila Proteins - chemistry
/ Drosophila Proteins - genetics
/ Fractionation
/ Genes
/ genetics
/ Genomes
/ Genomics
/ insect proteins
/ Insects
/ Life Sciences
/ Molecular Sequence Data
/ Peptides
/ Proteins
/ proteome
/ Proteome - chemistry
/ Proteome - genetics
/ Proteomics
/ Statistical analysis
2007
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high-quality catalog of the Drosophila melanogaster proteome
by
Baetschmann, H
, Loevenich, S
, Panse, C
, Deutsch, E.W
, Brunner, E
, Ahrens, C.H
, Lichtenberg, U. de
, Rinner, O
, Potthast, F
, Mohanty, S
in
Agriculture
/ Amino Acid Sequence
/ Animals
/ Biochemistry
/ Bioinformatics
/ Biomedical Engineering/Biotechnology
/ Biomedicine
/ Biotechnology
/ chemistry
/ Data collection
/ Databases, Protein
/ Drosophila
/ Drosophila melanogaster
/ Drosophila melanogaster - chemistry
/ Drosophila melanogaster - genetics
/ Drosophila Proteins
/ Drosophila Proteins - chemistry
/ Drosophila Proteins - genetics
/ Fractionation
/ Genes
/ genetics
/ Genomes
/ Genomics
/ insect proteins
/ Insects
/ Life Sciences
/ Molecular Sequence Data
/ Peptides
/ Proteins
/ proteome
/ Proteome - chemistry
/ Proteome - genetics
/ Proteomics
/ Statistical analysis
2007
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Do you wish to request the book?
high-quality catalog of the Drosophila melanogaster proteome
by
Baetschmann, H
, Loevenich, S
, Panse, C
, Deutsch, E.W
, Brunner, E
, Ahrens, C.H
, Lichtenberg, U. de
, Rinner, O
, Potthast, F
, Mohanty, S
in
Agriculture
/ Amino Acid Sequence
/ Animals
/ Biochemistry
/ Bioinformatics
/ Biomedical Engineering/Biotechnology
/ Biomedicine
/ Biotechnology
/ chemistry
/ Data collection
/ Databases, Protein
/ Drosophila
/ Drosophila melanogaster
/ Drosophila melanogaster - chemistry
/ Drosophila melanogaster - genetics
/ Drosophila Proteins
/ Drosophila Proteins - chemistry
/ Drosophila Proteins - genetics
/ Fractionation
/ Genes
/ genetics
/ Genomes
/ Genomics
/ insect proteins
/ Insects
/ Life Sciences
/ Molecular Sequence Data
/ Peptides
/ Proteins
/ proteome
/ Proteome - chemistry
/ Proteome - genetics
/ Proteomics
/ Statistical analysis
2007
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high-quality catalog of the Drosophila melanogaster proteome
Journal Article
high-quality catalog of the Drosophila melanogaster proteome
2007
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Overview
Understanding how proteins and their complex interaction networks convert the genomic information into a dynamic living organism is a fundamental challenge in biological sciences. As an important step towards understanding the systems biology of a complex eukaryote, we cataloged 63% of the predicted
Drosophila melanogaster
proteome by detecting 9,124 proteins from 498,000 redundant and 72,281 distinct peptide identifications. This unprecedented high proteome coverage for a complex eukaryote was achieved by combining sample diversity, multidimensional biochemical fractionation and analysis-driven experimentation feedback loops, whereby data collection is guided by statistical analysis of prior data. We show that high-quality proteomics data provide crucial information to amend genome annotation and to confirm many predicted gene models. We also present experimentally identified proteotypic peptides matching ∼50% of
D. melanogaster
gene models. This library of proteotypic peptides should enable fast, targeted and quantitative proteomic studies to elucidate the systems biology of this model organism.
Publisher
Nature Publishing Group UK,Nature Publishing Group
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