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Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
by
An, Qin
, Ji, Yazhong
, Lv, Bo
, Zhu, Xianmin
, Fan, Guoping
, Xue, Zhigang
, Zhang, Xunyi
, Zeng, Qiao
, Wang, Yanqiu
, Lu, Ping
in
Analysis
/ Biology and Life Sciences
/ Cell Culture Techniques
/ Cell Differentiation
/ Computational Biology - methods
/ Differentiation (biology)
/ Divergence
/ Embryo Implantation - genetics
/ Geffen, David
/ Gene expression
/ Gene Expression Regulation, Developmental
/ Gene Regulatory Networks
/ Gene sequencing
/ High-Throughput Nucleotide Sequencing
/ Human motion
/ Humans
/ Implantation
/ In vitro fertilization
/ Maternal & child health
/ Medical research
/ Medicine
/ Models, Biological
/ Morphology
/ Placenta
/ Regulatory mechanisms (biology)
/ Reproductive health
/ Research and Analysis Methods
/ Ribonucleic acid
/ RNA
/ RNA sequencing
/ Single-Cell Analysis
/ Stem cells
/ Studies
/ T-Box Domain Proteins - genetics
/ T-Box Domain Proteins - metabolism
/ Transcription factors
/ Transcriptome
/ Trophoblasts
/ Trophoblasts - cytology
/ Trophoblasts - metabolism
/ Zygote
2019
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Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
by
An, Qin
, Ji, Yazhong
, Lv, Bo
, Zhu, Xianmin
, Fan, Guoping
, Xue, Zhigang
, Zhang, Xunyi
, Zeng, Qiao
, Wang, Yanqiu
, Lu, Ping
in
Analysis
/ Biology and Life Sciences
/ Cell Culture Techniques
/ Cell Differentiation
/ Computational Biology - methods
/ Differentiation (biology)
/ Divergence
/ Embryo Implantation - genetics
/ Geffen, David
/ Gene expression
/ Gene Expression Regulation, Developmental
/ Gene Regulatory Networks
/ Gene sequencing
/ High-Throughput Nucleotide Sequencing
/ Human motion
/ Humans
/ Implantation
/ In vitro fertilization
/ Maternal & child health
/ Medical research
/ Medicine
/ Models, Biological
/ Morphology
/ Placenta
/ Regulatory mechanisms (biology)
/ Reproductive health
/ Research and Analysis Methods
/ Ribonucleic acid
/ RNA
/ RNA sequencing
/ Single-Cell Analysis
/ Stem cells
/ Studies
/ T-Box Domain Proteins - genetics
/ T-Box Domain Proteins - metabolism
/ Transcription factors
/ Transcriptome
/ Trophoblasts
/ Trophoblasts - cytology
/ Trophoblasts - metabolism
/ Zygote
2019
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Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
by
An, Qin
, Ji, Yazhong
, Lv, Bo
, Zhu, Xianmin
, Fan, Guoping
, Xue, Zhigang
, Zhang, Xunyi
, Zeng, Qiao
, Wang, Yanqiu
, Lu, Ping
in
Analysis
/ Biology and Life Sciences
/ Cell Culture Techniques
/ Cell Differentiation
/ Computational Biology - methods
/ Differentiation (biology)
/ Divergence
/ Embryo Implantation - genetics
/ Geffen, David
/ Gene expression
/ Gene Expression Regulation, Developmental
/ Gene Regulatory Networks
/ Gene sequencing
/ High-Throughput Nucleotide Sequencing
/ Human motion
/ Humans
/ Implantation
/ In vitro fertilization
/ Maternal & child health
/ Medical research
/ Medicine
/ Models, Biological
/ Morphology
/ Placenta
/ Regulatory mechanisms (biology)
/ Reproductive health
/ Research and Analysis Methods
/ Ribonucleic acid
/ RNA
/ RNA sequencing
/ Single-Cell Analysis
/ Stem cells
/ Studies
/ T-Box Domain Proteins - genetics
/ T-Box Domain Proteins - metabolism
/ Transcription factors
/ Transcriptome
/ Trophoblasts
/ Trophoblasts - cytology
/ Trophoblasts - metabolism
/ Zygote
2019
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Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
Journal Article
Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
2019
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Overview
Multipotent trophoblasts undergo dynamic morphological movement and cellular differentiation after conceptus implantation to generate placenta. However, the mechanism controlling trophoblast development and differentiation during peri-implantation development in human remains elusive. In this study, we modeled human conceptus peri-implantation development from blastocyst to early postimplantation stages by using an in vitro coculture system and profiled the transcriptome of 476 individual trophoblast cells from these conceptuses. We revealed the genetic networks regulating peri-implantation trophoblast development. While determining when trophoblast differentiation happens, our bioinformatic analysis identified T-box transcription factor 3 (TBX3) as a key regulator for the differentiation of cytotrophoblast (CT) into syncytiotrophoblast (ST). The function of TBX3 in trophoblast differentiation is then validated by a loss-of-function experiment. In conclusion, our results provided a valuable resource to study the regulation of trophoblasts development and differentiation during human peri-implantation development.
Publisher
Public Library of Science,Public Library of Science (PLoS)
Subject
/ Computational Biology - methods
/ Embryo Implantation - genetics
/ Gene Expression Regulation, Developmental
/ High-Throughput Nucleotide Sequencing
/ Humans
/ Medicine
/ Placenta
/ Regulatory mechanisms (biology)
/ Research and Analysis Methods
/ RNA
/ Studies
/ T-Box Domain Proteins - genetics
/ T-Box Domain Proteins - metabolism
/ Zygote
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