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QTL dissection and mining of candidate genes for Ascochyta fabae and Orobanche crenata resistance in faba bean (Vicia faba L.)
by
Gutierrez, Natalia
, Torres, Ana M.
in
Agricultural production
/ Agriculture
/ Alfalfa
/ Analysis
/ Ascochyta
/ Ascochyta fabae
/ Ascomycota - pathogenicity
/ Beans
/ Biomedical and Life Sciences
/ Blight
/ Broad beans
/ Candidates
/ Corrosion resistance
/ Crop diseases
/ Crops, Agricultural - genetics
/ Crops, Agricultural - microbiology
/ Crops, Agricultural - parasitology
/ Disease Resistance - genetics
/ dissection
/ Faba bean
/ faba beans
/ Gene Expression Regulation, Plant
/ Gene mapping
/ Genes
/ Genes, Plant
/ Genetic aspects
/ Genetic Markers
/ Genetic transcription
/ Genetic Variation
/ Genomics
/ Genotyping
/ Growth
/ Identification and classification
/ inbred lines
/ Inbreeding
/ Infections
/ Intervals
/ Legumes
/ Life Sciences
/ Map saturation
/ Mapping
/ Markers
/ Medicago
/ Medicago truncatula
/ Medicago truncatula - genetics
/ Methods
/ Mimosaceae
/ Orobanche
/ Orobanche - parasitology
/ Orobanche crenata
/ Pathogens
/ Plant resistance
/ Plant Sciences
/ Populations
/ Proteins
/ Quantitative genetics
/ Quantitative Trait Loci
/ Random amplified polymorphic DNA
/ Resistance
/ Single-nucleotide polymorphism
/ species
/ Synteny
/ Transcription factors
/ Tree Biology
/ Vicia faba
/ Vicia faba - genetics
/ Vicia faba - microbiology
/ Vicia faba - parasitology
2021
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QTL dissection and mining of candidate genes for Ascochyta fabae and Orobanche crenata resistance in faba bean (Vicia faba L.)
by
Gutierrez, Natalia
, Torres, Ana M.
in
Agricultural production
/ Agriculture
/ Alfalfa
/ Analysis
/ Ascochyta
/ Ascochyta fabae
/ Ascomycota - pathogenicity
/ Beans
/ Biomedical and Life Sciences
/ Blight
/ Broad beans
/ Candidates
/ Corrosion resistance
/ Crop diseases
/ Crops, Agricultural - genetics
/ Crops, Agricultural - microbiology
/ Crops, Agricultural - parasitology
/ Disease Resistance - genetics
/ dissection
/ Faba bean
/ faba beans
/ Gene Expression Regulation, Plant
/ Gene mapping
/ Genes
/ Genes, Plant
/ Genetic aspects
/ Genetic Markers
/ Genetic transcription
/ Genetic Variation
/ Genomics
/ Genotyping
/ Growth
/ Identification and classification
/ inbred lines
/ Inbreeding
/ Infections
/ Intervals
/ Legumes
/ Life Sciences
/ Map saturation
/ Mapping
/ Markers
/ Medicago
/ Medicago truncatula
/ Medicago truncatula - genetics
/ Methods
/ Mimosaceae
/ Orobanche
/ Orobanche - parasitology
/ Orobanche crenata
/ Pathogens
/ Plant resistance
/ Plant Sciences
/ Populations
/ Proteins
/ Quantitative genetics
/ Quantitative Trait Loci
/ Random amplified polymorphic DNA
/ Resistance
/ Single-nucleotide polymorphism
/ species
/ Synteny
/ Transcription factors
/ Tree Biology
/ Vicia faba
/ Vicia faba - genetics
/ Vicia faba - microbiology
/ Vicia faba - parasitology
2021
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QTL dissection and mining of candidate genes for Ascochyta fabae and Orobanche crenata resistance in faba bean (Vicia faba L.)
by
Gutierrez, Natalia
, Torres, Ana M.
in
Agricultural production
/ Agriculture
/ Alfalfa
/ Analysis
/ Ascochyta
/ Ascochyta fabae
/ Ascomycota - pathogenicity
/ Beans
/ Biomedical and Life Sciences
/ Blight
/ Broad beans
/ Candidates
/ Corrosion resistance
/ Crop diseases
/ Crops, Agricultural - genetics
/ Crops, Agricultural - microbiology
/ Crops, Agricultural - parasitology
/ Disease Resistance - genetics
/ dissection
/ Faba bean
/ faba beans
/ Gene Expression Regulation, Plant
/ Gene mapping
/ Genes
/ Genes, Plant
/ Genetic aspects
/ Genetic Markers
/ Genetic transcription
/ Genetic Variation
/ Genomics
/ Genotyping
/ Growth
/ Identification and classification
/ inbred lines
/ Inbreeding
/ Infections
/ Intervals
/ Legumes
/ Life Sciences
/ Map saturation
/ Mapping
/ Markers
/ Medicago
/ Medicago truncatula
/ Medicago truncatula - genetics
/ Methods
/ Mimosaceae
/ Orobanche
/ Orobanche - parasitology
/ Orobanche crenata
/ Pathogens
/ Plant resistance
/ Plant Sciences
/ Populations
/ Proteins
/ Quantitative genetics
/ Quantitative Trait Loci
/ Random amplified polymorphic DNA
/ Resistance
/ Single-nucleotide polymorphism
/ species
/ Synteny
/ Transcription factors
/ Tree Biology
/ Vicia faba
/ Vicia faba - genetics
/ Vicia faba - microbiology
/ Vicia faba - parasitology
2021
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QTL dissection and mining of candidate genes for Ascochyta fabae and Orobanche crenata resistance in faba bean (Vicia faba L.)
Journal Article
QTL dissection and mining of candidate genes for Ascochyta fabae and Orobanche crenata resistance in faba bean (Vicia faba L.)
2021
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Overview
Background
Ascochyta blight caused by
Ascochyta fabae
Speg. and broomrape (
Orobanche crenata)
are among the economically most significant pathogens of faba bean. Several QTLs conferring resistance against the two pathogens have been identified and validated in different genetic backgrounds. The aim of this study was to saturate the most stable QTLs for ascochyta and broomrape resistance in two Recombinant Inbred Line (RIL) populations, 29H x Vf136 and Vf6 x Vf136, to identify candidate genes conferring resistance against these two pathogens.
Results
We exploited the synteny between faba bean and the model species
Medicago truncatula
by selecting a set of 219 genes encoding putative WRKY transcription factors and defense related proteins falling within the target QTL intervals, for genotyping and marker saturation in the two RIL populations. Seventy and 50 of the candidate genes could be mapped in 29H x Vf136 and Vf6 x Vf136, respectively. Besides the strong reduction of the QTL intervals, the mapping process allowed replacing previous dominant and pedigree-specific RAPD flanking markers with robust and transferrable SNP markers, revealing promising candidates for resistance against the two pathogens.
Conclusions
Although further efforts in association mapping and expression studies will be required to corroborate the candidate genes for resistance, the fine-mapping approach proposed here increases the genetic resolution of relevant QTL regions and paves the way for an efficient deployment of useful alleles for faba bean ascochyta and broomrape resistance through marker-assisted breeding.
Publisher
BioMed Central,BioMed Central Ltd,Springer Nature B.V,BMC
Subject
/ Alfalfa
/ Analysis
/ Beans
/ Biomedical and Life Sciences
/ Blight
/ Crops, Agricultural - genetics
/ Crops, Agricultural - microbiology
/ Crops, Agricultural - parasitology
/ Disease Resistance - genetics
/ Gene Expression Regulation, Plant
/ Genes
/ Genomics
/ Growth
/ Identification and classification
/ Legumes
/ Mapping
/ Markers
/ Medicago
/ Medicago truncatula - genetics
/ Methods
/ Proteins
/ Random amplified polymorphic DNA
/ Single-nucleotide polymorphism
/ species
/ Synteny
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