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Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations
by
Lee, Sang-im
, Nishiumi, Isao
, Satta, Yoko
, Eimes, John A.
, Townsend, Andrea K.
, Jablonski, Piotr
in
Biodiversity
/ Biology and Life Sciences
/ Birds
/ Computer simulation
/ Corvidae
/ Dab1 protein
/ Disabled-1 protein
/ Divergence
/ Evolution
/ Gene duplication
/ Genes
/ Genetic aspects
/ Genomes
/ Genomics
/ Immune response
/ Immune system
/ Loci
/ Major histocompatibility complex
/ Markov chains
/ Markov processes
/ Medicine and Health Sciences
/ Monte Carlo methods
/ Monte Carlo simulation
/ Passeriformes
/ Phylogenetics
/ Phylogeny
/ Plant resistance
/ Polymorphism
/ Radiation (Physics)
/ Reproduction (copying)
/ Research and Analysis Methods
/ Speciation
/ Species diversity
/ Taxonomy
/ Terrestrial environments
/ Vertebrates
2016
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Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations
by
Lee, Sang-im
, Nishiumi, Isao
, Satta, Yoko
, Eimes, John A.
, Townsend, Andrea K.
, Jablonski, Piotr
in
Biodiversity
/ Biology and Life Sciences
/ Birds
/ Computer simulation
/ Corvidae
/ Dab1 protein
/ Disabled-1 protein
/ Divergence
/ Evolution
/ Gene duplication
/ Genes
/ Genetic aspects
/ Genomes
/ Genomics
/ Immune response
/ Immune system
/ Loci
/ Major histocompatibility complex
/ Markov chains
/ Markov processes
/ Medicine and Health Sciences
/ Monte Carlo methods
/ Monte Carlo simulation
/ Passeriformes
/ Phylogenetics
/ Phylogeny
/ Plant resistance
/ Polymorphism
/ Radiation (Physics)
/ Reproduction (copying)
/ Research and Analysis Methods
/ Speciation
/ Species diversity
/ Taxonomy
/ Terrestrial environments
/ Vertebrates
2016
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Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations
by
Lee, Sang-im
, Nishiumi, Isao
, Satta, Yoko
, Eimes, John A.
, Townsend, Andrea K.
, Jablonski, Piotr
in
Biodiversity
/ Biology and Life Sciences
/ Birds
/ Computer simulation
/ Corvidae
/ Dab1 protein
/ Disabled-1 protein
/ Divergence
/ Evolution
/ Gene duplication
/ Genes
/ Genetic aspects
/ Genomes
/ Genomics
/ Immune response
/ Immune system
/ Loci
/ Major histocompatibility complex
/ Markov chains
/ Markov processes
/ Medicine and Health Sciences
/ Monte Carlo methods
/ Monte Carlo simulation
/ Passeriformes
/ Phylogenetics
/ Phylogeny
/ Plant resistance
/ Polymorphism
/ Radiation (Physics)
/ Reproduction (copying)
/ Research and Analysis Methods
/ Speciation
/ Species diversity
/ Taxonomy
/ Terrestrial environments
/ Vertebrates
2016
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Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations
Journal Article
Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations
2016
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Overview
A key characteristic of MHC genes is the persistence of allelic lineages over macroevolutionary periods, often through multiple speciation events. This phenomenon, known as trans-species polymorphism (TSP), is well documented in several major taxonomic groups, but has less frequently been observed in birds. The order Passeriformes is arguably the most successful terrestrial vertebrate order in terms of diversity of species and ecological range, but the reasons for this success remain unclear. Passerines exhibit the most highly duplicated MHC genes of any major vertebrate taxonomic group, which may generate increased immune response relative to other avian orders with fewer MHC loci. Here, we describe phylogenetic patterns of the MHC IIB in the passerine family Corvidae. Our results indicate wide-spread TSP within this family, with at least four supported MHC IIB allelic lineages that predate speciation by many millions of years. Markov chain Monte Carlo simulations indicate that divergence of these lineages occurred near the time of the divergence of the Passeriformes and other avian orders. We suggest that the current MHC diversity observed in passerines is due in part to the multiple duplication of a single MHC locus, DAB1, early in passerine evolution and that subsequent duplications of these paralogues have contributed to the enormous success of this order by increasing their ability to recognize and mount immune responses to novel pathogens.
Publisher
Public Library of Science,Public Library of Science (PLoS)
Subject
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