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Analyses of Ca2+ dynamics using a ubiquitin‐10 promoter‐driven Yellow Cameleon 3.6 indicator reveal reliable transgene expression and differences in cytoplasmic Ca2+ responses in Arabidopsis and rice (Oryza sativa) roots
by
Schmitz‐Thom, Ina
, Strohkamp, Sarah
, Kudla, Jörg
, Behera, Smrutisanjita
, Xiong, Lizhong
, Zhang, Chunxia
, Schültke, Stefanie
, Hashimoto, Kenji
, Wang, Nili
in
35S promoter Yellow Cameleon 3.6 (YC3.6)
/ Amino acids
/ Arabidopsis
/ Arabidopsis - cytology
/ Arabidopsis - genetics
/ Arabidopsis - metabolism
/ Arabidopsis thaliana
/ calcium
/ Calcium - analysis
/ Calcium - metabolism
/ Calcium imaging
/ Calcium ions
/ Calcium Signaling
/ Calcium signalling
/ Calmodulin - genetics
/ Calmodulin - metabolism
/ Comparative analysis
/ Comparative studies
/ Cytoplasm - metabolism
/ Depolarization
/ DNA
/ Dynamics
/ Gene Expression
/ Genes, Reporter
/ Genetic code
/ glutamic acid
/ Glutamic Acid - metabolism
/ Hyperpolarization
/ Image Processing, Computer-Assisted
/ Luminescent Proteins - genetics
/ Luminescent Proteins - metabolism
/ Microscopy, Confocal
/ mutants
/ Oryza - cytology
/ Oryza - genetics
/ Oryza - metabolism
/ Oryza sativa
/ Plant Proteins - genetics
/ Plant Proteins - metabolism
/ Plant Roots - genetics
/ Plant Roots - metabolism
/ Plants, Genetically Modified
/ Promoter Regions, Genetic - genetics
/ Promoters
/ proteins
/ Recombinant Fusion Proteins - genetics
/ Recombinant Fusion Proteins - metabolism
/ Rice
/ rice (Oryza sativa)
/ Roots
/ Signaling
/ Signatures
/ Species
/ transfer DNA
/ Transgenes
/ two‐pore channel 1 (tpc1)
/ Ubiquitin
/ ubiquitin‐10 (UBQ10) promoter
2015
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Analyses of Ca2+ dynamics using a ubiquitin‐10 promoter‐driven Yellow Cameleon 3.6 indicator reveal reliable transgene expression and differences in cytoplasmic Ca2+ responses in Arabidopsis and rice (Oryza sativa) roots
by
Schmitz‐Thom, Ina
, Strohkamp, Sarah
, Kudla, Jörg
, Behera, Smrutisanjita
, Xiong, Lizhong
, Zhang, Chunxia
, Schültke, Stefanie
, Hashimoto, Kenji
, Wang, Nili
in
35S promoter Yellow Cameleon 3.6 (YC3.6)
/ Amino acids
/ Arabidopsis
/ Arabidopsis - cytology
/ Arabidopsis - genetics
/ Arabidopsis - metabolism
/ Arabidopsis thaliana
/ calcium
/ Calcium - analysis
/ Calcium - metabolism
/ Calcium imaging
/ Calcium ions
/ Calcium Signaling
/ Calcium signalling
/ Calmodulin - genetics
/ Calmodulin - metabolism
/ Comparative analysis
/ Comparative studies
/ Cytoplasm - metabolism
/ Depolarization
/ DNA
/ Dynamics
/ Gene Expression
/ Genes, Reporter
/ Genetic code
/ glutamic acid
/ Glutamic Acid - metabolism
/ Hyperpolarization
/ Image Processing, Computer-Assisted
/ Luminescent Proteins - genetics
/ Luminescent Proteins - metabolism
/ Microscopy, Confocal
/ mutants
/ Oryza - cytology
/ Oryza - genetics
/ Oryza - metabolism
/ Oryza sativa
/ Plant Proteins - genetics
/ Plant Proteins - metabolism
/ Plant Roots - genetics
/ Plant Roots - metabolism
/ Plants, Genetically Modified
/ Promoter Regions, Genetic - genetics
/ Promoters
/ proteins
/ Recombinant Fusion Proteins - genetics
/ Recombinant Fusion Proteins - metabolism
/ Rice
/ rice (Oryza sativa)
/ Roots
/ Signaling
/ Signatures
/ Species
/ transfer DNA
/ Transgenes
/ two‐pore channel 1 (tpc1)
/ Ubiquitin
/ ubiquitin‐10 (UBQ10) promoter
2015
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Analyses of Ca2+ dynamics using a ubiquitin‐10 promoter‐driven Yellow Cameleon 3.6 indicator reveal reliable transgene expression and differences in cytoplasmic Ca2+ responses in Arabidopsis and rice (Oryza sativa) roots
by
Schmitz‐Thom, Ina
, Strohkamp, Sarah
, Kudla, Jörg
, Behera, Smrutisanjita
, Xiong, Lizhong
, Zhang, Chunxia
, Schültke, Stefanie
, Hashimoto, Kenji
, Wang, Nili
in
35S promoter Yellow Cameleon 3.6 (YC3.6)
/ Amino acids
/ Arabidopsis
/ Arabidopsis - cytology
/ Arabidopsis - genetics
/ Arabidopsis - metabolism
/ Arabidopsis thaliana
/ calcium
/ Calcium - analysis
/ Calcium - metabolism
/ Calcium imaging
/ Calcium ions
/ Calcium Signaling
/ Calcium signalling
/ Calmodulin - genetics
/ Calmodulin - metabolism
/ Comparative analysis
/ Comparative studies
/ Cytoplasm - metabolism
/ Depolarization
/ DNA
/ Dynamics
/ Gene Expression
/ Genes, Reporter
/ Genetic code
/ glutamic acid
/ Glutamic Acid - metabolism
/ Hyperpolarization
/ Image Processing, Computer-Assisted
/ Luminescent Proteins - genetics
/ Luminescent Proteins - metabolism
/ Microscopy, Confocal
/ mutants
/ Oryza - cytology
/ Oryza - genetics
/ Oryza - metabolism
/ Oryza sativa
/ Plant Proteins - genetics
/ Plant Proteins - metabolism
/ Plant Roots - genetics
/ Plant Roots - metabolism
/ Plants, Genetically Modified
/ Promoter Regions, Genetic - genetics
/ Promoters
/ proteins
/ Recombinant Fusion Proteins - genetics
/ Recombinant Fusion Proteins - metabolism
/ Rice
/ rice (Oryza sativa)
/ Roots
/ Signaling
/ Signatures
/ Species
/ transfer DNA
/ Transgenes
/ two‐pore channel 1 (tpc1)
/ Ubiquitin
/ ubiquitin‐10 (UBQ10) promoter
2015
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Analyses of Ca2+ dynamics using a ubiquitin‐10 promoter‐driven Yellow Cameleon 3.6 indicator reveal reliable transgene expression and differences in cytoplasmic Ca2+ responses in Arabidopsis and rice (Oryza sativa) roots
Journal Article
Analyses of Ca2+ dynamics using a ubiquitin‐10 promoter‐driven Yellow Cameleon 3.6 indicator reveal reliable transgene expression and differences in cytoplasmic Ca2+ responses in Arabidopsis and rice (Oryza sativa) roots
2015
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Overview
Ca²⁺signatures are central to developmental processes and adaptive responses in plants. However, high‐resolution studies of Ca²⁺dynamics using genetically encoded Ca²⁺indicators (GECIs) such as Yellow Cameleon (YC) proteins have so far not been conducted in important model crops such as rice (Oryza sativa). We conducted a comparative study of 35S and ubiquitin‐10 (UBQ10) promoter functionality in Arabidopsis thaliana and O. sativa plants expressing the Ca²⁺indicator Yellow Cameleon 3.6 (YC3.6) under control of the UBQ10 or 35S promoter. Ca²⁺signatures in roots of both species were analyzed during exposure to hyperpolarization/depolarization cycles or in response to application of the amino acid glutamate. We found a superior performance of the UBQ10 promoter with regard to expression pattern, levels and expression stabilities in both species. We observed remarkable differences between the two species in the spatiotemporal parameters of the observed Ca²⁺signatures. Rice appeared in general to respond with a lower maximal signal amplitude but greatly increased signal duration when compared with Arabidopsis. Our results identify important advantages to using the UBQ10 promoter in Arabidopsis and rice and in T‐DNA mutant backgrounds. Moreover, the observed differences in Ca²⁺signaling in the two species underscore the need for comparative studies to achieve a comprehensive understanding of Ca²⁺signaling in plants.
Publisher
Academic Press,New Phytologist Trust,Wiley Subscription Services, Inc
Subject
35S promoter Yellow Cameleon 3.6 (YC3.6)
/ calcium
/ DNA
/ Dynamics
/ Image Processing, Computer-Assisted
/ Luminescent Proteins - genetics
/ Luminescent Proteins - metabolism
/ mutants
/ Plants, Genetically Modified
/ Promoter Regions, Genetic - genetics
/ proteins
/ Recombinant Fusion Proteins - genetics
/ Recombinant Fusion Proteins - metabolism
/ Rice
/ Roots
/ Species
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