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Background The Auxin Responsive Factor ( ARF ) family plays a crucial role in mediating auxin signal transduction and is vital for plant growth and development. However, the function of ARF genes in Korean pine ( Pinus koraiensis ), a conifer species of significant economic value, remains unclear. Results This study utilized the whole genome of Korean pine to conduct bioinformatics analysis, resulting in the identification of 13 ARF genes. A phylogenetic analysis revealed that these 13 PkorARF genes can be classified into 4 subfamilies, indicating the presence of conserved structural characteristics within each subfamily. Protein interaction prediction indicated that Pkor01G00962.1 and Pkor07G00704.1 may have a significant role in regulating plant growth and development as core components of the PkorARFs family. Additionally, the analysis of RNA-seq and RT-qPCR expression patterns suggested that PkorARF genes play a crucial role in the development process of Korean pine. Conclusion Pkor01G00962.1 and Pkor07G00704.1 , which are core genes of the PkorARFs family, play a potentially crucial role in regulating the fertilization and developmental process of Korean pine. This study provides a valuable reference for investigating the molecular mechanism of embryonic development in Korean pine and establishes a foundation for cultivating high-quality Korean pine.

Background GATA transcription factors, a type of zinc-finger DNA-binding protein, play a crucial role in regulating various biological processes including plant growth, stress response, and hormone signaling by controlling the expression of target genes. Recently, GATA genes have been discovered in numerous plant species. However, they have not yet been reported in Korean pine ( Pinus koraiensis ). Results In this study, a total of 15 PkorGATA genes were identified in the whole genome of Korean pine. These PkorGATA genes are unevenly distributed across nine chromosomes and are categorized into four subfamilies based on their conserved structural domains. The results of cis-acting element analysis, RNA-seq, and qRT-PCR indicate that PkorGATA genes play a significant role in the developmental processes of Korean pine ovules. Moreover, subcellular localization results revealed that PkorGATA2 , PkorGATA3 , PkorGATA8 , PkorGATA9 , PkorGATA10 and PkorGATA11 are localized in the nucleus. The transcriptional activation activity of six PkorGATA proteins in yeast showed that PkorGATA2, PkorGATA3, and PkorGATA10 exhibit transcriptional activation capabilities, suggesting that their potential function as transcription factors within the nucleus. Conclusion In general, this study provides candidate gene resources for functional exploration of GATA genes.

To predict the effects of nitrogen deposition on nitrogen-mineralizing enzyme activity and soil microbial community structure in artificial temperate forests in northern China, we studied the soil properties, nitrogen-mineralizing enzyme activity, and microbial community structure in the soil of a Korean pine plantation in which different concentrations (0, 20, 40, 80 kg N ha−1 year−1) of ammonium nitrate were applied for 5 consecutive years. The results showed that nitrogen addition at different concentrations did not significantly affect the soil pH. High nitrogen addition (80 kg N ha−1 year−1) significantly increased the soil organic matter, ammonium nitrogen, and nitrate nitrogen content in the Korean pine plantation, and ammonium nitrogen was the key factor that influenced the soil fungal community structure. The urease activity under the moderate nitrogen addition treatment (40 kg N ha−1 year−1) was significantly lower than that under the control (0 kg N ha−1 year−1), and the protease activity in the three treatments was also significantly lower than that in the control. There was no significant correlation between microbial community structure and the four mineralizing enzymes. After nitrogen addition at different concentrations, the Simpson and Shannon indexes of soil bacteria decreased significantly under low nitrogen addition (20 kg N ha−1 year−1), but the α-diversity index of soil fungi did not show significant differences under nitrogen addition. The microbial community composition was significantly changed by the different treatments. PLS-DA analysis showed that Tardiphaga was an important genus that made the greatest contribution to the differences in bacterial community composition among treatments, as was Taeniolella for fungal community composition. The low level of nitrogen addition inhibited nitrogen mineralization in the Korean pine plantation by reducing the relative abundances of Nitrosomonadaceae and Betaproteobacteriales and by reducing the abundances of symbiotrophic fungi. Berkelbacteria and Polyporales were bacteria and fungi, respectively, that changed significantly under the high nitrogen addition treatment (80 kg N ha−1 year−1). This study provides more data to support predictions of the changes in nitrogen-mineralizing enzyme activity and microbial community structure in artificial temperate forest soils in response to increased nitrogen deposition.

Background Early selection in tree breeding could be achieved by addressing the longevity of tree improvement activities. Genetic parameter changes and age–age correlations are essential for determining the optimal timing of early selection. Practical tracking of genetic parameters of Pinus koraiensis , a major timber species with economic and ecological value, has become feasible as its progeny testing has entered the mid-term age in Korea. However, research on the age−age correlation of P. koraiensis as progeny trials approach rotation age is limited. This study aimed to investigate genetic parameter trends and age−age correlations in P. koraiensis progeny. P. koraiensis progeny were assessed at two sites using a linear mixed-effects model with two-dimensional spatial autoregressive structure. Height, diameter, and volume growth were measured in 11 assessments over 40 years. Results Genetic parameters, such as height and diameter, showed different patterns of change. The heritability ranged for the three growth traits in 0.083–0.710, 0.288–0.781, and 0.299–0.755 across the sites and age. Height heritability and its coefficient of variance decreased, whereas the diameter and volume estimates remained relatively constant. Correlations with Age 40 for phenotypic, genetic, and rank of breeding values ranged between 0.16 and 0.92, 0.594 and 0.988, and 0.412 and 0.965, respectively. These correlations generally increased as the age approached Age 40, with particularly high levels observed at Age 26 and Age 30. Conclusion The observed genetic trends in P. koraiensis progeny testing offer valuable insights for early and precise selection. Notably, selecting superior genotypes at Ages 26–30 is supported by discernible genetic gains and robust correlations. Future research should integrate unbalanced data for selecting mother trees or families and conduct a comprehensive economic analysis of early selection to validate its practical benefits.

Fungal endophytes are ubiquitous in nature. They are known as potential sources of natural products, and possible agents for biocontrol attributing to their ability to produce a repertoire of bioactive compounds. In this study, we isolated fungal endophytes from three different tissues (needle, stem and root) of four Pinus species (Pinus densiflora, Pinus koraiensis, Pnus rigida, and Pinus thunbergii) across 18 sampling sites in Korea. A total number of 5872 culturable fungal endophytes were isolated using standard culturing techniques. Molecular identification based on the sequence analyses of the internal transcribed spacer (ITS) or 28S ribosomal DNA revealed a total of 234 different fungal species. The isolated fungal endophytes belonged to Ascomycota (91.06%), Basidiomycota (5.95%) and Mucoromycota (2.97%), with 144 operational taxonomic units (OTUs) and 88 different genera. In all sampling sites, the highest species richness (S) was observed in site 1T (51 OTUs) while the lowest was observed in site 4T (27 OTUs). In terms of diversity, as measured by Shannon diversity index (H’), the sampling site 2D (H′ = 3.216) showed the highest while the lowest H’ was observed in site 2K (H’ = 2.232). Species richness (S) in three different tissues revealed that root and needle tissues are highly colonized with fungal endophytes compared to stem tissue. No significant difference was observed in the diversity of endophytes in three different tissues. Among the four Pinus species, P. thunbergii exhibited the highest species richness and diversity of fungal endophytes. Our findings also revealed that the environmental factors have no significant impact in shaping the composition of the fungal endophytes. Furthermore, FUNGuild analysis revealed three major classifications of fungal endophytes based on trophic modes namely saprotrophs, symbiotrophs, and pathotrophs in four Pinus species, with high proportions of saprotrophs and pathothrops.

Pinus koraiensis is famous for its high-quality timber production all the way and is much more famous for its high value health-care nut oil production potential since 1990’s, but the less understanding of its reproduction biology seriously hindered its nut productivity increase. Exploring the effects of reproduction on nutrient uptake, allocation and storage help to understand and modify reproduction patterns in masting species and high nut yield cultivar selection and breeding. Here, we compared seasonality in growth and in nitrogen ([N]) and phosphorus ([P]) concentrations in needles, branches and cones of reproductive (cone-bearing) and vegetative branches (having no cones) of P. koraiensis during a masting year. The growth of one- and two-year-old reproductive branches was significantly higher than that of vegetative branches. Needle, phloem and xylem [N] and [P] were lower in reproductive branches than in vegetative branches, although the extent and significance of the differences between branch types varied across dates. [N] and [P] in most tissues were high in spring, decreased during summer, and then recovered by the end of the growing season. Overall, [N] and [P] were highest in needles, lowest in the xylem and intermediate in the phloem. More than half of the N (73.5%) and P (51.6%) content in reproductive branches were allocated to cones. There was a positive correlation between cone number and N and P content in needles (R 2 = 0.64, R 2 = 0.73) and twigs (R 2 = 0.65, R 2 = 0.62) of two-year-old reproductive branches. High nutrient sink strength of cones and vegetative tissues of reproductive branches suggested that customized fertilization practices can help improve crop yield in Pinus koraiensis .

Korean pine is an economically essential afforestation species limited by the unreasonable collection of cones, indiscriminate use of chemical pesticides and pest damage. This study aimed to determine whether spraying bacterial or fungal solutions affected insect pests, cone development, and the seed quality of Korean pine Pinus koraiensis Sieb. et Zucc. The experiment was conducted in a forest plantation in Linkou County (Heilongjiang, China) in 2019. Four fungal strains and one bacterial strain were applied during the flowering phase of Korean pine. The results after a year and a half of study indicated that a high concentration of Bacillus thuringiensis 223176 promoted cone development, increased seed weight, and reduced the proportion of damaged cones. Under this treatment, there were 15.873% damaged cones; the seed weight reached 0.829 g, and there were 82.738% fully developed cones. Trees treated with the second most effective strain, Beauveria bassiana 122077, had 30.556% damaged cones and an average seed weight of 0.810 g. Leucanicillium antillanum 01 performed the worst in this study. The seed weight was only 0.775 g, and the damaged and fully developed cones were 52.444 and 41.773%, respectively. In summary, spraying bacterial or fungal solutions during the flowering stage of Korean pine positively impacted seed quality and effectively decreased damage by the lepidopteran species that feed on the cones and seeds in this study.

BACKGROUND AND AIMS: : The factors controlling litter decomposition and soil microbial community are important regulators of biogeochemical processes. Here we aim to explore controls on litter decomposition dynamics and soil microbial community composition in temperate forest by comparing three Korean pine forests along an altitudinal gradient. METHODS: : Single- and mixed-species litter decomposition rates were determined by the litterbag method and soil microbial community composition was characterized by PLFAs. RESULTS: : Litter decomposition rates decreased with altitude regardless of litter type, and were controlled by temperature. Generally, fine root litter decomposed more rapidly than leaf litter, and mixed-species litter decomposed faster than single-species. Soil microbial biomass C and N decreased with altitude and varied differently among forest types in response to soil temperature and nutrient status. Fungal: bacterial PLFA ratios were significantly larger in forests receiving relatively poor litter quality inputs. Soil temperature, soil water content, total soil N and P were all directly related to the changes in total PLFAs among three forests. CONCLUSIONS: : In these Korean pines dominated temperate forests, environmental changes associated with altitude gradient drive decomposition dynamics and soil microbial community composition. This implies that climate change might be an important factor affecting these systems in the future.

Pinus koraiensis (PK) leaf extract, derived from Korean pine byproducts, holds promise for alleviating postprandial hyperlipidemia. In this study, we investigated the potential of PK leaf extract for modulating postprandial hyperlipidemia in adults with normal or borderline fasting triglyceride levels. In a randomized, double-blind, parallel design, 70 subjects were randomly assigned to either the placebo or PK group for 4 weeks. After 4 weeks of consuming PK leaf extract, the results indicated a trend toward decreased serum apolipoprotein B-100 (ApoB100) levels 2 h after a high-fat challenge. Furthermore, significant improvements were observed in the incremental area under the curve (iAUC) at 0–4 h and 2–4 h compared to baseline, particularly among individuals with a higher body weight (>61.35 kg) and daily caloric intake (>1276.5 kcal). Based on these findings, PK leaf extract may have beneficial effects on postprandial lipoprotein metabolism, especially among individuals with a relatively high body weight and caloric intake.

Key messageKorean pine trees expressed significant crown displacement. Nearest neighbor competition had the largest effect on the crown displacement compared to the slope direction and mean direction of wind.The crown displacement of individual trees exhibits an adaptive response driven by neighbors, but it can also be the result of wind force and slope effects. In our research, we focused on the crown displacement of planted Korean pine trees in northeast China. A total of 51 trees aged 8–56 years were destructively harvested to measure branch attributes. The gravity centers of the upper, lower and entire crown were calculated. The Markov chain Monte Carlo (MCMC) algorithm, generalized mixed effects model, and circular statistics were used to determine the response of crown displacement to biotic and abiotic factors. The results showed that the dominant tree had the largest absolute crown displacement, and the suppressed tree expressed the largest relative crown displacement. The lower crown showed more apparent crown displacement than the upper crown. The Korean pine was displaced in a northeastern direction. Nearest neighbor competition had the largest effect on the crown displacement compared to the slope direction. Slope direction had a slightly larger effect than the mean direction of wind. The crown displacement for the lower crown was more affected by the interaction of the wind, slope and neighbor competition than the upper crown. No relationship between crown displacement and stem eccentricity for the planted Korean pine was detected.