Journal Article

Early Detection of Bacterial Wilt in Tomato with Portable Hyperspectral Spectrometer

Hu, Shunshi, Huang, Ying, Zhang, Jian, Cen, Yi, Zhang, Lifu

2022

Overview

As a kind of soil-borne epidemic disease, bacterial wilt (BW) is one of the most serious diseases in tomatoes in southern China, which may significantly reduce food quality and the total amount of yield. Hyperspectral remote sensing can detect crop diseases in the early stages and offers potential for BW detection in tomatoes. Tomatoes in southern China are commonly cultivated in greenhouses or bird nets, limiting the application of remote sensing based on natural sunlight. To resolve these issues, we collected the spectrum of tomatoes firstly using the HS-VN1000B Portable Intelligent Spectrometer, which is equipped with a simulated solar light source. We then proposed a tomato BW detection model based on some optimal spectral features. Specifically, these optimal features, including vegetation indexes and principal components (PCs), were extracted by the sequential forward selection (SFS), the simulated annealing (SA), and the genetic algorithm (GA) and were finally fed into the support vector machine (SVM) classifier to detect diseased tomatoes. The results showed that the infected and healthy tomatoes exhibit different spectral characteristics for both leave and stem spectra, especially for near-infrared bands. In addition, the BW detecting model built by the combination of GA and SVM (GA-SVM) achieved the best performance with overall accuracies (OA) of 90.7% for leaves and 92.6% for stems. Compared with the results based on leaves, spectral features of stems provided better accuracy, indicating that the symptom of early infection of BW is more significant in tomato stems than in leaves. Further, the reliability of the GA-SVM tomato stem model was verified in our 2022 experiment with an OA of 88.6% and an F1 score of 0.80. Our study provides an effective means to detect BW disease of tomatoes in the early stages, which could help farmers manage their tomato production and effectively prevent pesticide abuse.

• Publisher: MDPI AG
• Subject: Agricultural production / bacterial wilt / bacterial wilt disease / birds / China / Crop diseases / Epidemics / Farm buildings / Feature extraction / Food quality / Genetic algorithms / Heuristic / hyperspectral remote sensing / infection detection / Infrared spectra / Leaves / Light sources / lighting / Near infrared radiation / Performance indices / Pesticides / Plant diseases / Portability / Remote sensing / Simulated annealing / Soil microorganisms / solar radiation / spectrometers / Stems / Support vector machines / tomato / Tomatoes / vegetation / Wilt