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Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression
by
Liu, Yajing
, Zou, Weiwei
, Ji, Dongmei
, Guo, Fan
, Zhang, Fan
, Pu, Zhixin
, He, Xiaojin
, Zhu, Ran
, Zhang, Jing
, Long, Xin
, Zhang, Zhiguo
, Wang, Tianjuan
, Hu, Yuqiong
, Wang, Mengyao
, Cheng, Xin
, Yan, Rui
, Zhang, Ying
, Hou, Xinling
, Cao, Yunxia
, Liang, Dan
, Song, Bing
, Sun, Fengyuan
in
13/1
/ 13/100
/ 13/109
/ 13/31
/ 13/44
/ 13/89
/ 14
/ 14/19
/ 38
/ 38/23
/ 5-Methylcytosine - analogs & derivatives
/ 5-Methylcytosine - metabolism
/ 631/136
/ 631/208/176
/ Animals
/ Binding Sites
/ Biomedical and Life Sciences
/ Blastocyst - metabolism
/ Cancer Research
/ Cell Biology
/ Cell Lineage - genetics
/ Cytosine - analogs & derivatives
/ Cytosine - metabolism
/ Deoxyribonucleic acid
/ Developmental Biology
/ Dioxygenases - genetics
/ Dioxygenases - metabolism
/ DNA
/ DNA Methylation
/ DNA-Binding Proteins - genetics
/ DNA-Binding Proteins - metabolism
/ Dynamics
/ Embryogenesis
/ Embryonic Development - genetics
/ Embryonic growth stage
/ Embryos
/ Epigenesis, Genetic
/ Epigenetics
/ Female
/ Fertilization
/ Gametocytes
/ Gene expression
/ Gene Expression Regulation, Developmental
/ Genes
/ Humans
/ Life Sciences
/ Male
/ Mice
/ Oocytes - metabolism
/ Otx Transcription Factors - genetics
/ Otx Transcription Factors - metabolism
/ Otx2 protein
/ Proto-Oncogene Proteins - genetics
/ Proto-Oncogene Proteins - metabolism
/ Stem Cells
/ Transcription activation
2024
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Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression
by
Liu, Yajing
, Zou, Weiwei
, Ji, Dongmei
, Guo, Fan
, Zhang, Fan
, Pu, Zhixin
, He, Xiaojin
, Zhu, Ran
, Zhang, Jing
, Long, Xin
, Zhang, Zhiguo
, Wang, Tianjuan
, Hu, Yuqiong
, Wang, Mengyao
, Cheng, Xin
, Yan, Rui
, Zhang, Ying
, Hou, Xinling
, Cao, Yunxia
, Liang, Dan
, Song, Bing
, Sun, Fengyuan
in
13/1
/ 13/100
/ 13/109
/ 13/31
/ 13/44
/ 13/89
/ 14
/ 14/19
/ 38
/ 38/23
/ 5-Methylcytosine - analogs & derivatives
/ 5-Methylcytosine - metabolism
/ 631/136
/ 631/208/176
/ Animals
/ Binding Sites
/ Biomedical and Life Sciences
/ Blastocyst - metabolism
/ Cancer Research
/ Cell Biology
/ Cell Lineage - genetics
/ Cytosine - analogs & derivatives
/ Cytosine - metabolism
/ Deoxyribonucleic acid
/ Developmental Biology
/ Dioxygenases - genetics
/ Dioxygenases - metabolism
/ DNA
/ DNA Methylation
/ DNA-Binding Proteins - genetics
/ DNA-Binding Proteins - metabolism
/ Dynamics
/ Embryogenesis
/ Embryonic Development - genetics
/ Embryonic growth stage
/ Embryos
/ Epigenesis, Genetic
/ Epigenetics
/ Female
/ Fertilization
/ Gametocytes
/ Gene expression
/ Gene Expression Regulation, Developmental
/ Genes
/ Humans
/ Life Sciences
/ Male
/ Mice
/ Oocytes - metabolism
/ Otx Transcription Factors - genetics
/ Otx Transcription Factors - metabolism
/ Otx2 protein
/ Proto-Oncogene Proteins - genetics
/ Proto-Oncogene Proteins - metabolism
/ Stem Cells
/ Transcription activation
2024
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Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression
by
Liu, Yajing
, Zou, Weiwei
, Ji, Dongmei
, Guo, Fan
, Zhang, Fan
, Pu, Zhixin
, He, Xiaojin
, Zhu, Ran
, Zhang, Jing
, Long, Xin
, Zhang, Zhiguo
, Wang, Tianjuan
, Hu, Yuqiong
, Wang, Mengyao
, Cheng, Xin
, Yan, Rui
, Zhang, Ying
, Hou, Xinling
, Cao, Yunxia
, Liang, Dan
, Song, Bing
, Sun, Fengyuan
in
13/1
/ 13/100
/ 13/109
/ 13/31
/ 13/44
/ 13/89
/ 14
/ 14/19
/ 38
/ 38/23
/ 5-Methylcytosine - analogs & derivatives
/ 5-Methylcytosine - metabolism
/ 631/136
/ 631/208/176
/ Animals
/ Binding Sites
/ Biomedical and Life Sciences
/ Blastocyst - metabolism
/ Cancer Research
/ Cell Biology
/ Cell Lineage - genetics
/ Cytosine - analogs & derivatives
/ Cytosine - metabolism
/ Deoxyribonucleic acid
/ Developmental Biology
/ Dioxygenases - genetics
/ Dioxygenases - metabolism
/ DNA
/ DNA Methylation
/ DNA-Binding Proteins - genetics
/ DNA-Binding Proteins - metabolism
/ Dynamics
/ Embryogenesis
/ Embryonic Development - genetics
/ Embryonic growth stage
/ Embryos
/ Epigenesis, Genetic
/ Epigenetics
/ Female
/ Fertilization
/ Gametocytes
/ Gene expression
/ Gene Expression Regulation, Developmental
/ Genes
/ Humans
/ Life Sciences
/ Male
/ Mice
/ Oocytes - metabolism
/ Otx Transcription Factors - genetics
/ Otx Transcription Factors - metabolism
/ Otx2 protein
/ Proto-Oncogene Proteins - genetics
/ Proto-Oncogene Proteins - metabolism
/ Stem Cells
/ Transcription activation
2024
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Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression
Journal Article
Distinct dynamics of parental 5-hydroxymethylcytosine during human preimplantation development regulate early lineage gene expression
2024
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Overview
The conversion of DNA 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) by TET enzymes represents a significant epigenetic modification, yet its role in early human embryos remains largely unknown. Here we showed that the early human embryo inherited a significant amount of 5hmCs from an oocyte, which unexpectedly underwent de novo hydroxymethylation during its growth. Furthermore, the generation of 5hmC in the paternal genome after fertilization roughly followed the maternal pattern, which was linked to DNA methylation dynamics and regions of sustained methylation. The 5hmCs persisted until the eight-cell stage and exhibited high enrichment at OTX2 binding sites, whereas knockdown of OTX2 in human embryos compromised the expression of early lineage genes. Specifically, the depletion of 5hmC affected the activation of embryonic genes, which was further evaluated by ectopically expressing mouse Tet3 in human early embryos. These findings revealed distinct dynamics of 5hmC and unravelled its multifaceted functions in early human embryonic development.
Liang, Yan, Long, Ji et al. find that the origin and dynamics of 5-hydroxymethylcytosine (5hmC) during early development are not conserved between humans and mice and that 5hmC contributes to the activation of human embryonic genes.
Publisher
Nature Publishing Group UK,Nature Publishing Group
Subject
/ 13/100
/ 13/109
/ 13/31
/ 13/44
/ 13/89
/ 14
/ 14/19
/ 38
/ 38/23
/ 5-Methylcytosine - analogs & derivatives
/ 5-Methylcytosine - metabolism
/ 631/136
/ Animals
/ Biomedical and Life Sciences
/ Cytosine - analogs & derivatives
/ DNA
/ DNA-Binding Proteins - genetics
/ DNA-Binding Proteins - metabolism
/ Dynamics
/ Embryonic Development - genetics
/ Embryos
/ Female
/ Gene Expression Regulation, Developmental
/ Genes
/ Humans
/ Male
/ Mice
/ Otx Transcription Factors - genetics
/ Otx Transcription Factors - metabolism
/ Proto-Oncogene Proteins - genetics
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