Journal Article

MicroRNA dysregulation in ataxia telangiectasia

Carissimo, Annamaria, Cirillo, Emilia, Brusco, Alfredo, Badolato, Raffaele, Pozzi, Elisa, Damiano, Carla, Giardino, Giuliana, Dellepiane, Rosa Maria, Ferracin, Manuela, Ferrero, Giulio, Montin, Davide, Carrabba, Maria, Soresina, Annarosa, Baselli, Lucia A., Conti, Francesca, De Rosa, Antonio, Pignata, Claudio, Bertolini, Patrizia, Parenti, Giancarlo, Fabio, Giovanna, Romano, Roberta, Tarallo, Antonietta, Toriello, Elisabetta, Roncarati, Roberta

2024

Overview

Ataxia telangiectasia (AT) is a rare disorder characterized by neurodegeneration, combined immunodeficiency, a predisposition to malignancies, and high clinical variability. Profiling of microRNAs (miRNAs) may offer insights into the underlying mechanisms of complex rare human diseases, as miRNAs play a role in various biological functions including proliferation, differentiation, and DNA repair. In this study, we investigate the differential expression of miRNAs in samples from AT patients to identify miRNA patterns and analyze how these patterns are related to the disease. We enrolled 20 AT patients (mean age 17.7 ± 9.6 years old) and collected clinical and genetic data. We performed short non-coding RNA-seq analysis on peripheral blood mononuclear cells (PBMCs) and fibroblasts to compare the miRNA expression profile between AT patients and controls. We observed 42 differentially expressed (DE)-miRNAs in blood samples and 26 in fibroblast samples. Among these, three DE-miRNAs, miR-342-3p, miR-30a-5p, and miR-195-5p, were further validated in additional AT samples, confirming their dysregulation. We identified an AT-related miRNA signature in blood cells and fibroblast samples collected from a group of AT patients. We also predicted several dysregulated pathways, primarily related to cancer, immune system control, or inflammatory processes. The findings suggest that miRNAs may provide insights into the pathophysiology and tumorigenesis of AT and have the potential to serve as useful biomarkers in cancer research.

• Publisher: Frontiers Media SA,Frontiers Media S.A
• Subject: Adolescent / Adult / Ataxia / Ataxia telangiectasia / Ataxia Telangiectasia - genetics / Blood cells / cancer / Cell cycle / Child / Chromosomes / DNA repair / Female / Fibroblasts / Fibroblasts - metabolism / Gene Expression Profiling / Gene Expression Regulation / Generalized linear models / Genetic disorders / Humans / Immune system / Immunodeficiency / Immunology / Kinases / Leukocytes (mononuclear) / Leukocytes, Mononuclear - metabolism / Lymphocytes / Male / Malignancy / microRNA / MicroRNAs / MicroRNAs - blood / MicroRNAs - genetics / miRNA / Neurodegeneration / Pathophysiology / Peripheral blood mononuclear cells / Tumorigenesis / Young Adult