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Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes
by
Yu, Dan-Na
, Zhang, Jia-Yong
, Cao, Yu-Rou
, Guan, Jia-Yin
, Cai, Yin-Yin
, Xu, Xiao-Dong
, Storey, Kenneth B.
, Zhang, Zi-Yi
in
Biotechnology industry
/ Canada
/ cold stress
/ energy
/ Energy requirements
/ Ephemeroptera
/ Evolution & development
/ Gene rearrangement
/ Genes
/ Genomes
/ Genomics
/ Heptageniidae
/ Insects
/ Low temperature
/ Metabolism
/ Mitochondria
/ mitochondrial genome
/ monophyly
/ Morphology
/ non-coding region (NCR)
/ phylogenetic relationship
/ Phylogenetics
/ Phylogeny
/ Positive selection
/ selection pressure
/ selective stress analysis
/ Species
/ Synapomorphy
/ Temperature gradients
/ Temperature requirements
/ tRNA
/ Water temperature
2021
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Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes
by
Yu, Dan-Na
, Zhang, Jia-Yong
, Cao, Yu-Rou
, Guan, Jia-Yin
, Cai, Yin-Yin
, Xu, Xiao-Dong
, Storey, Kenneth B.
, Zhang, Zi-Yi
in
Biotechnology industry
/ Canada
/ cold stress
/ energy
/ Energy requirements
/ Ephemeroptera
/ Evolution & development
/ Gene rearrangement
/ Genes
/ Genomes
/ Genomics
/ Heptageniidae
/ Insects
/ Low temperature
/ Metabolism
/ Mitochondria
/ mitochondrial genome
/ monophyly
/ Morphology
/ non-coding region (NCR)
/ phylogenetic relationship
/ Phylogenetics
/ Phylogeny
/ Positive selection
/ selection pressure
/ selective stress analysis
/ Species
/ Synapomorphy
/ Temperature gradients
/ Temperature requirements
/ tRNA
/ Water temperature
2021
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Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes
by
Yu, Dan-Na
, Zhang, Jia-Yong
, Cao, Yu-Rou
, Guan, Jia-Yin
, Cai, Yin-Yin
, Xu, Xiao-Dong
, Storey, Kenneth B.
, Zhang, Zi-Yi
in
Biotechnology industry
/ Canada
/ cold stress
/ energy
/ Energy requirements
/ Ephemeroptera
/ Evolution & development
/ Gene rearrangement
/ Genes
/ Genomes
/ Genomics
/ Heptageniidae
/ Insects
/ Low temperature
/ Metabolism
/ Mitochondria
/ mitochondrial genome
/ monophyly
/ Morphology
/ non-coding region (NCR)
/ phylogenetic relationship
/ Phylogenetics
/ Phylogeny
/ Positive selection
/ selection pressure
/ selective stress analysis
/ Species
/ Synapomorphy
/ Temperature gradients
/ Temperature requirements
/ tRNA
/ Water temperature
2021
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Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes
Journal Article
Insight into the Phylogenetic Relationships among Three Subfamilies within Heptageniidae (Insecta: Ephemeroptera) along with Low-Temperature Selection Pressure Analyses Using Mitogenomes
2021
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Overview
We determined 15 complete and two nearly complete mitogenomes of Heptageniidae belonging to three subfamilies (Heptageniinae, Rhithrogeninae, and Ecdyonurinae) and six genera (Afronurus, Epeorus, Leucrocuta, Maccaffertium, Stenacron, and Stenonema). Species of Rhithrogeninae and Ecdyonurinae had the same gene rearrangement of CR-I-M-Q-M-ND2, whereas a novel gene rearrangement of CR-I-M-Q-NCR-ND2 was found in Heptageniinae. Non-coding regions (NCRs) of 25–47 bp located between trnA and trnR were observed in all mayflies of Heptageniidae, which may be a synapomorphy for Heptageniidae. Both the BI and ML phylogenetic analyses supported the monophyly of Heptageniidae and its subfamilies (Heptageniinae, Rhithrogeninae, and Ecdyonurinae). The phylogenetic results combined with gene rearrangements and NCR locations confirmed the relationship of the subfamilies as (Heptageniinae + (Rhithrogeninae + Ecdyonurinae)). To assess the effects of low-temperature stress on Heptageniidae species from Ottawa, Canada, we found 27 positive selection sites in eight protein-coding genes (PCGs) using the branch-site model. The selection pressure analyses suggested that mitochondrial PCGs underwent positive selection to meet the energy requirements under low-temperature stress.
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