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A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence
by
Gainey, Maria D.
, Miller, Justin M.
, Stamey, Brandon
, Brambley, Chad A.
, Gragg, Kimberly N.
, Green, William C.
, Cafferty, Erin R.
, Hollis, Thomas J.
, Hammel, Michal
, McGinnis, Reliza J.
, Terwilliger, Thomas C.
, Wallen, Jamie R.
in
119/118
/ 49/23
/ 631/326/596
/ 631/45/147
/ 631/45/612/1229
/ 631/535/1266
/ 82/80
/ 82/83
/ Asymmetry
/ BASIC BIOLOGICAL SCIENCES
/ Binding sites
/ biological science
/ Crystal structure
/ Deoxyribonucleic acid
/ DNA
/ DNA structure
/ DNA0binding proteins
/ Drug resistance
/ Elongation
/ Gene expression
/ Gene regulation
/ Gene sequencing
/ Genomes
/ Humanities and Social Sciences
/ Immunity
/ Infections
/ Molecular dynamics
/ multidisciplinary
/ Nucleotide sequence
/ Phages
/ Proteins
/ Repressors
/ Science
/ Science (multidisciplinary)
/ Science education
/ Superinfection
/ Transcription elongation
/ Transcription initiation
/ virology
/ x-ray crystallography
/ X-ray scattering
2022
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A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence
by
Gainey, Maria D.
, Miller, Justin M.
, Stamey, Brandon
, Brambley, Chad A.
, Gragg, Kimberly N.
, Green, William C.
, Cafferty, Erin R.
, Hollis, Thomas J.
, Hammel, Michal
, McGinnis, Reliza J.
, Terwilliger, Thomas C.
, Wallen, Jamie R.
in
119/118
/ 49/23
/ 631/326/596
/ 631/45/147
/ 631/45/612/1229
/ 631/535/1266
/ 82/80
/ 82/83
/ Asymmetry
/ BASIC BIOLOGICAL SCIENCES
/ Binding sites
/ biological science
/ Crystal structure
/ Deoxyribonucleic acid
/ DNA
/ DNA structure
/ DNA0binding proteins
/ Drug resistance
/ Elongation
/ Gene expression
/ Gene regulation
/ Gene sequencing
/ Genomes
/ Humanities and Social Sciences
/ Immunity
/ Infections
/ Molecular dynamics
/ multidisciplinary
/ Nucleotide sequence
/ Phages
/ Proteins
/ Repressors
/ Science
/ Science (multidisciplinary)
/ Science education
/ Superinfection
/ Transcription elongation
/ Transcription initiation
/ virology
/ x-ray crystallography
/ X-ray scattering
2022
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A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence
by
Gainey, Maria D.
, Miller, Justin M.
, Stamey, Brandon
, Brambley, Chad A.
, Gragg, Kimberly N.
, Green, William C.
, Cafferty, Erin R.
, Hollis, Thomas J.
, Hammel, Michal
, McGinnis, Reliza J.
, Terwilliger, Thomas C.
, Wallen, Jamie R.
in
119/118
/ 49/23
/ 631/326/596
/ 631/45/147
/ 631/45/612/1229
/ 631/535/1266
/ 82/80
/ 82/83
/ Asymmetry
/ BASIC BIOLOGICAL SCIENCES
/ Binding sites
/ biological science
/ Crystal structure
/ Deoxyribonucleic acid
/ DNA
/ DNA structure
/ DNA0binding proteins
/ Drug resistance
/ Elongation
/ Gene expression
/ Gene regulation
/ Gene sequencing
/ Genomes
/ Humanities and Social Sciences
/ Immunity
/ Infections
/ Molecular dynamics
/ multidisciplinary
/ Nucleotide sequence
/ Phages
/ Proteins
/ Repressors
/ Science
/ Science (multidisciplinary)
/ Science education
/ Superinfection
/ Transcription elongation
/ Transcription initiation
/ virology
/ x-ray crystallography
/ X-ray scattering
2022
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A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence
Journal Article
A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence
2022
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Overview
Regulation of bacteriophage gene expression involves repressor proteins that bind and downregulate early lytic promoters. A large group of mycobacteriophages code for repressors that are unusual in also terminating transcription elongation at numerous binding sites (stoperators) distributed across the phage genome. Here we provide the X-ray crystal structure of a mycobacteriophage immunity repressor bound to DNA, which reveals the binding of a monomer to an asymmetric DNA sequence using two independent DNA binding domains. The structure is supported by small-angle X-ray scattering, DNA binding, molecular dynamics, and in vivo immunity assays. We propose a model for how dual DNA binding domains facilitate regulation of both transcription initiation and elongation, while enabling evolution of other superinfection immune specificities.
Bacteriophage repressor proteins downregulate viral lytic gene expression. Herein, the authors present the X-ray crystal structure of a monomeric repressor that binds an asymmetric DNA sequence using two independent domains.
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