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High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation
by
Romain F. Laine
, Damián Martínez
, Jonathon Nixon-Abell
, Audrey Salles
, Angélique Jimenez
, Jesse Goyette
, Hannah S. Heil
, Guillaume Jacquemet
, Christophe Leterrier
, Theresa Wiesner
, Siân Culley
, Simao Coelho
, Gautier Follain
, Samantha Webster
, Tommaso Galgani
, Aki Stubb
, Ricardo Henriques
, Aurelien Dauphin
, Louise Régnier
, Bassam Hajj
in
631/114/1564
/ 631/1647/328/2238
/ 631/57/2265
/ [SDV]Life Sciences [q-bio]
/ Accuracy
/ Bioinformatics
/ Biological Microscopy
/ Biological Techniques
/ Biomedical and Life Sciences
/ Biomedical Engineering/Biotechnology
/ Fluctuations
/ Image enhancement
/ Image processing
/ Image resolution
/ Information retrieval
/ Life Sciences
/ Microscopy
/ Microscopy, Fluorescence
/ Microscopy, Fluorescence - methods
/ Optimization
/ Parameters
/ Proteomics
/ Single-molecule biophysics
/ Super-resolution microscopy
2023
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High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation
by
Romain F. Laine
, Damián Martínez
, Jonathon Nixon-Abell
, Audrey Salles
, Angélique Jimenez
, Jesse Goyette
, Hannah S. Heil
, Guillaume Jacquemet
, Christophe Leterrier
, Theresa Wiesner
, Siân Culley
, Simao Coelho
, Gautier Follain
, Samantha Webster
, Tommaso Galgani
, Aki Stubb
, Ricardo Henriques
, Aurelien Dauphin
, Louise Régnier
, Bassam Hajj
in
631/114/1564
/ 631/1647/328/2238
/ 631/57/2265
/ [SDV]Life Sciences [q-bio]
/ Accuracy
/ Bioinformatics
/ Biological Microscopy
/ Biological Techniques
/ Biomedical and Life Sciences
/ Biomedical Engineering/Biotechnology
/ Fluctuations
/ Image enhancement
/ Image processing
/ Image resolution
/ Information retrieval
/ Life Sciences
/ Microscopy
/ Microscopy, Fluorescence
/ Microscopy, Fluorescence - methods
/ Optimization
/ Parameters
/ Proteomics
/ Single-molecule biophysics
/ Super-resolution microscopy
2023
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High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation
by
Romain F. Laine
, Damián Martínez
, Jonathon Nixon-Abell
, Audrey Salles
, Angélique Jimenez
, Jesse Goyette
, Hannah S. Heil
, Guillaume Jacquemet
, Christophe Leterrier
, Theresa Wiesner
, Siân Culley
, Simao Coelho
, Gautier Follain
, Samantha Webster
, Tommaso Galgani
, Aki Stubb
, Ricardo Henriques
, Aurelien Dauphin
, Louise Régnier
, Bassam Hajj
in
631/114/1564
/ 631/1647/328/2238
/ 631/57/2265
/ [SDV]Life Sciences [q-bio]
/ Accuracy
/ Bioinformatics
/ Biological Microscopy
/ Biological Techniques
/ Biomedical and Life Sciences
/ Biomedical Engineering/Biotechnology
/ Fluctuations
/ Image enhancement
/ Image processing
/ Image resolution
/ Information retrieval
/ Life Sciences
/ Microscopy
/ Microscopy, Fluorescence
/ Microscopy, Fluorescence - methods
/ Optimization
/ Parameters
/ Proteomics
/ Single-molecule biophysics
/ Super-resolution microscopy
2023
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High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation
Journal Article
High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation
2023
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Overview
Live-cell super-resolution microscopy enables the imaging of biological structure dynamics below the diffraction limit. Here we present enhanced super-resolution radial fluctuations (eSRRF), substantially improving image fidelity and resolution compared to the original SRRF method. eSRRF incorporates automated parameter optimization based on the data itself, giving insight into the trade-off between resolution and fidelity. We demonstrate eSRRF across a range of imaging modalities and biological systems. Notably, we extend eSRRF to three dimensions by combining it with multifocus microscopy. This realizes live-cell volumetric super-resolution imaging with an acquisition speed of ~1 volume per second. eSRRF provides an accessible super-resolution approach, maximizing information extraction across varied experimental conditions while minimizing artifacts. Its optimal parameter prediction strategy is generalizable, moving toward unbiased and optimized analyses in super-resolution microscopy.
Enhanced super-resolution radial fluctuations (eSRRF) offers improved image fidelity and resolution compared to the popular SRRF method and further enables volumetric live-cell super-resolution imaging at high speeds.
Publisher
Springer Science and Business Media LLC,Nature Publishing Group US,Nature Publishing Group
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