Journal Article

A Generic Sure Independence Screening Procedure

Wang, Xueqin, Pan, Wenliang, Xiao, Weinan, Zhu, Hongtu

2019

Overview

Extracting important features from ultra-high dimensional data is one of the primary tasks in statistical learning, information theory, precision medicine, and biological discovery. Many of the sure independent screening methods developed to meet these needs are suitable for special models under some assumptions. With the availability of more data types and possible models, a model-free generic screening procedure with fewer and less restrictive assumptions is desirable. In this article, we propose a generic nonparametric sure independence screening procedure, called BCor-SIS, on the basis of a recently developed universal dependence measure: Ball correlation. We show that the proposed procedure has strong screening consistency even when the dimensionality is an exponential order of the sample size without imposing sub-exponential moment assumptions on the data. We investigate the flexibility of this procedure by considering three commonly encountered challenging settings in biological discovery or precision medicine: iterative BCor-SIS, interaction pursuit, and survival outcomes. We use simulation studies and real data analyses to illustrate the versatility and practicability of our BCor-SIS method. Supplementary materials for this article are available online.

• Publisher: Taylor & Francis,Taylor & Francis Group, LLC,Taylor & Francis Ltd
• Subject: Ball correlation / Computer simulation / Correlation analysis / Data / Dependence / Discovery / Feature extraction / Flexibility / Grammatical aspect / Independence / Information theory / Iterative methods / Learning / mathematical theory / Medicine / Precision medicine / Rank / Regression analysis / sample size / Screening / Simulation / Statistical methods / Statistics / Sure independence / Tests / Theory and Methods / Variable screening