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Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
by
Andrews, Simon R
, Angermueller, Christof
, Lee, Heather J
, Reik, Wolf
, Peat, Julian
, Krueger, Felix
, Saadeh, Heba
, Kelsey, Gavin
, Smallwood, Sébastien A
, Stegle, Oliver
in
45
/ 45/23
/ 631/1647/2210/2213
/ Animals
/ Bioinformatics
/ Biological Microscopy
/ Biological Techniques
/ Biomedical Engineering/Biotechnology
/ brief-communication
/ Cell culture
/ Deoxyribonucleic acid
/ DNA
/ DNA Methylation
/ DNA sequencing
/ Epigenesis, Genetic
/ Epigenetic inheritance
/ Genome
/ Heterogeneity
/ Identification and classification
/ Life Sciences
/ Measurement
/ Methods
/ Methylation
/ Mice
/ Nucleotide sequencing
/ Observations
/ Proteomics
/ Stem cells
/ Sulfites - chemistry
2014
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Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
by
Andrews, Simon R
, Angermueller, Christof
, Lee, Heather J
, Reik, Wolf
, Peat, Julian
, Krueger, Felix
, Saadeh, Heba
, Kelsey, Gavin
, Smallwood, Sébastien A
, Stegle, Oliver
in
45
/ 45/23
/ 631/1647/2210/2213
/ Animals
/ Bioinformatics
/ Biological Microscopy
/ Biological Techniques
/ Biomedical Engineering/Biotechnology
/ brief-communication
/ Cell culture
/ Deoxyribonucleic acid
/ DNA
/ DNA Methylation
/ DNA sequencing
/ Epigenesis, Genetic
/ Epigenetic inheritance
/ Genome
/ Heterogeneity
/ Identification and classification
/ Life Sciences
/ Measurement
/ Methods
/ Methylation
/ Mice
/ Nucleotide sequencing
/ Observations
/ Proteomics
/ Stem cells
/ Sulfites - chemistry
2014
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Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
by
Andrews, Simon R
, Angermueller, Christof
, Lee, Heather J
, Reik, Wolf
, Peat, Julian
, Krueger, Felix
, Saadeh, Heba
, Kelsey, Gavin
, Smallwood, Sébastien A
, Stegle, Oliver
in
45
/ 45/23
/ 631/1647/2210/2213
/ Animals
/ Bioinformatics
/ Biological Microscopy
/ Biological Techniques
/ Biomedical Engineering/Biotechnology
/ brief-communication
/ Cell culture
/ Deoxyribonucleic acid
/ DNA
/ DNA Methylation
/ DNA sequencing
/ Epigenesis, Genetic
/ Epigenetic inheritance
/ Genome
/ Heterogeneity
/ Identification and classification
/ Life Sciences
/ Measurement
/ Methods
/ Methylation
/ Mice
/ Nucleotide sequencing
/ Observations
/ Proteomics
/ Stem cells
/ Sulfites - chemistry
2014
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Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
Journal Article
Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
2014
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Overview
Single-cell bisulfite sequencing (scBS-seq) allows robust DNA methylation analysis in rare cells and heterogeneous populations.
We report a single-cell bisulfite sequencing (scBS-seq) method that can be used to accurately measure DNA methylation at up to 48.4% of CpG sites. Embryonic stem cells grown in serum or in 2i medium displayed epigenetic heterogeneity, with '2i-like' cells present in serum culture. Integration of 12 individual mouse oocyte datasets largely recapitulated the whole DNA methylome, which makes scBS-seq a versatile tool to explore DNA methylation in rare cells and heterogeneous populations.
Publisher
Nature Publishing Group US,Nature Publishing Group
Subject
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