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Differentiation of lymphocytic-plasmacytic enteropathy and small cell lymphoma in cats using histology-guided mass spectrometry
by
Smoot, Katy
, Seeley, Erin H.
, Newman, Shelley J.
, Marsilio, Sina
, Estep, James Scot
, Morley, Paul S.
, Warry, Emma
, Giaretta, Paula R.
, Powell, Matthew J.
, Flory, Andi
, Steiner, Jörg M.
, Lidbury, Jonathan A.
, Suchodolski, Jan S.
in
Algorithms
/ Animals
/ Annotations
/ Antigens
/ artificial intelligence
/ Cat Diseases - pathology
/ Cats
/ chronic enteropathy
/ Classification
/ clonality testing
/ confidence interval
/ digestive system diseases
/ Enteropathy-Associated T-Cell Lymphoma - pathology
/ Enteropathy-Associated T-Cell Lymphoma - veterinary
/ feline
/ HGMS
/ Histology
/ Histopathology
/ Immunohistochemistry
/ inflammatory bowel disease
/ inflammatory enteropathy
/ Ions
/ Laboratories
/ Lasers
/ Leukemia, Lymphocytic, Chronic, B-Cell - pathology
/ Leukemia, Lymphocytic, Chronic, B-Cell - veterinary
/ Lymphoma
/ Machine learning
/ MALDI mass spectrometry
/ Mass spectrometry
/ Mass Spectrometry - methods
/ PARR
/ PCR for antigen receptor rearrangements
/ Polymerase chain reaction
/ Principal components analysis
/ Retrospective Studies
/ Scientific imaging
/ Sensitivity and Specificity
/ SMALL ANIMAL
/ small cell lymphoma
/ Veterinary medicine
2020
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Differentiation of lymphocytic-plasmacytic enteropathy and small cell lymphoma in cats using histology-guided mass spectrometry
by
Smoot, Katy
, Seeley, Erin H.
, Newman, Shelley J.
, Marsilio, Sina
, Estep, James Scot
, Morley, Paul S.
, Warry, Emma
, Giaretta, Paula R.
, Powell, Matthew J.
, Flory, Andi
, Steiner, Jörg M.
, Lidbury, Jonathan A.
, Suchodolski, Jan S.
in
Algorithms
/ Animals
/ Annotations
/ Antigens
/ artificial intelligence
/ Cat Diseases - pathology
/ Cats
/ chronic enteropathy
/ Classification
/ clonality testing
/ confidence interval
/ digestive system diseases
/ Enteropathy-Associated T-Cell Lymphoma - pathology
/ Enteropathy-Associated T-Cell Lymphoma - veterinary
/ feline
/ HGMS
/ Histology
/ Histopathology
/ Immunohistochemistry
/ inflammatory bowel disease
/ inflammatory enteropathy
/ Ions
/ Laboratories
/ Lasers
/ Leukemia, Lymphocytic, Chronic, B-Cell - pathology
/ Leukemia, Lymphocytic, Chronic, B-Cell - veterinary
/ Lymphoma
/ Machine learning
/ MALDI mass spectrometry
/ Mass spectrometry
/ Mass Spectrometry - methods
/ PARR
/ PCR for antigen receptor rearrangements
/ Polymerase chain reaction
/ Principal components analysis
/ Retrospective Studies
/ Scientific imaging
/ Sensitivity and Specificity
/ SMALL ANIMAL
/ small cell lymphoma
/ Veterinary medicine
2020
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Differentiation of lymphocytic-plasmacytic enteropathy and small cell lymphoma in cats using histology-guided mass spectrometry
by
Smoot, Katy
, Seeley, Erin H.
, Newman, Shelley J.
, Marsilio, Sina
, Estep, James Scot
, Morley, Paul S.
, Warry, Emma
, Giaretta, Paula R.
, Powell, Matthew J.
, Flory, Andi
, Steiner, Jörg M.
, Lidbury, Jonathan A.
, Suchodolski, Jan S.
in
Algorithms
/ Animals
/ Annotations
/ Antigens
/ artificial intelligence
/ Cat Diseases - pathology
/ Cats
/ chronic enteropathy
/ Classification
/ clonality testing
/ confidence interval
/ digestive system diseases
/ Enteropathy-Associated T-Cell Lymphoma - pathology
/ Enteropathy-Associated T-Cell Lymphoma - veterinary
/ feline
/ HGMS
/ Histology
/ Histopathology
/ Immunohistochemistry
/ inflammatory bowel disease
/ inflammatory enteropathy
/ Ions
/ Laboratories
/ Lasers
/ Leukemia, Lymphocytic, Chronic, B-Cell - pathology
/ Leukemia, Lymphocytic, Chronic, B-Cell - veterinary
/ Lymphoma
/ Machine learning
/ MALDI mass spectrometry
/ Mass spectrometry
/ Mass Spectrometry - methods
/ PARR
/ PCR for antigen receptor rearrangements
/ Polymerase chain reaction
/ Principal components analysis
/ Retrospective Studies
/ Scientific imaging
/ Sensitivity and Specificity
/ SMALL ANIMAL
/ small cell lymphoma
/ Veterinary medicine
2020
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Differentiation of lymphocytic-plasmacytic enteropathy and small cell lymphoma in cats using histology-guided mass spectrometry
Journal Article
Differentiation of lymphocytic-plasmacytic enteropathy and small cell lymphoma in cats using histology-guided mass spectrometry
2020
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Overview
Abstract
Background
Differentiation of lymphocytic-plasmacytic enteropathy (LPE) from small cell lymphoma (SCL) in cats can be challenging.
Hypothesis/Objective
Histology-guided mass spectrometry (HGMS) is a suitable method for the differentiation of LPE from SCL in cats.
Animals
Forty-one cats with LPE and 52 cats with SCL.
Methods
This is a retrospective clinicopathologic study. Duodenal tissue samples of 17 cats with LPE and 22 cats with SCL were subjected to HGMS, and the acquired data were used to develop a linear discriminate analysis (LDA) machine learning algorithm. The algorithm was subsequently validated using a separate set of 24 cats with LPE and 30 cats with SCL. Cases were classified as LPE or SCL based on a consensus by an expert panel consisting of 5-7 board-certified veterinary specialists. Histopathology, immunohistochemistry, and clonality testing were available for all cats. The panel consensus classification served as a reference for the calculation of test performance parameters.
Results
Relative sensitivity, specificity, and accuracy of HGMS were 86.7% (95% confidence interval [CI]: 74.5%-98.8%), 91.7% (95% CI: 80.6%-100%), and 88.9% (95% CI: 80.5%-97.3%), respectively. Comparatively, the clonality testing had a sensitivity, specificity, and accuracy of 85.7% (95% CI: 72.8%-98.7%), 33.3% (95% CI: 14.5%-52.2%), and 61.5% (95% CI: 48.3%-74.8%) relative to the panel decision.
Conclusions and Clinical Importance
Histology-guided mass spectrometry was a reliable technique for the differentiation of LPE from SCL in duodenal formalin-fixed paraffin-embedded samples of cats and might have advantages over tests currently considered state of the art.
Publisher
Oxford University Press,John Wiley & Sons, Inc
Subject
/ Animals
/ Antigens
/ Cats
/ Enteropathy-Associated T-Cell Lymphoma - pathology
/ Enteropathy-Associated T-Cell Lymphoma - veterinary
/ feline
/ HGMS
/ Ions
/ Lasers
/ Leukemia, Lymphocytic, Chronic, B-Cell - pathology
/ Leukemia, Lymphocytic, Chronic, B-Cell - veterinary
/ Lymphoma
/ PARR
/ PCR for antigen receptor rearrangements
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