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Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
by
Paternoster, Lavinia
, Broer, Linda
, Eriksson, Johan G
, Hottenga, Jouke J
, Luan, Jian'an
, Couch, Fergus J
, Andrulis, Irene L
, Sarkar, Abhishek K
, Nutile, Teresa
, Harris, Tamara B
, Gandin, Ilaria
, McCarthy, Mark I
, van Dijk, Ko Willems
, Stolk, Lisette
, Bolla, Manjeet K
, Nalls, Mike A
, Guénel, Pascal
, Peters, Annette
, Pedersen, Nancy
, Robino, Antonietta
, Altmaier, Elisabeth
, Benitez, Javier
, Brand, Judith S
, Navarro, Pau
, Wang, Qin
, Ruggiero, Daniela
, Boutin, Thibaud
, Uitterlinden, André G
, Campbell, Harry
, Lenarduzzi, Stefania
, Murray, Anna
, Bochud, Murielle
, Langenberg, Claudia
, Beckmann, Matthias W
, Boerwinkle, Eric
, Kutalik, Zoltan
, Davey Smith, George
, Gudbjartsson, Daniel F
, Czene, Kamila
, Ferrucci, Luigi
, Magnusson, Patrik K E
, Lind, Penelope A
, Rahman, Iffat
, Dunning, Alison M
, Catamo, Eulalia
, Rose, Lynda M
, LaChance, Genevieve
, Timpson, Nicholas J
, Helgason, Hannes
, Smith, Albert V
, Launer, Lenore J
, Palotie, Aarno
, Price, Alkes L
, Meisinger, Christa
, Ulivi, Sheila
, Lunetta, Kathryn L
, Porteous, David
, Hamann, Ute
, Edwards, Digna R Velez
, Medland, Sarah E
, Pouta, Anneli
, Dennis, Joe
, Wareham, Nichola
in
45/43
/ 631/208/205/2138
/ 692/699/2732
/ 692/699/67
/ Adolescent
/ Age
/ Age Factors
/ Agriculture
/ Animal Genetics and Genomics
/ Biomedicine
/ Body mass
/ Body Mass Index
/ Breast
/ Breast cancer
/ Calcium-Binding Proteins
/ Cancer
/ Cancer Research
/ Carcinogenesis
/ Children
/ Coding
/ Complexity
/ Databases, Genetic
/ Diseases
/ Endocrinology
/ Endometrial cancer
/ Endometrium
/ Enrichment
/ Epidemiology
/ Female
/ Gene expression
/ Gene Function
/ Genes
/ Genetic aspects
/ Genetic Predisposition to Disease
/ Genetic variation
/ Genetics
/ Genome-Wide Association Study
/ Genomes
/ Genomic analysis
/ Genomic Imprinting
/ Genomics
/ Gynecology
/ Health aspects
/ Health risks
/ Heritability
/ Hospitals
/ Human Genetics
/ Humans
/ Intercellular Signaling Peptides and Proteins - genetics
/ Internal medicine
/ Laboratories
/ Life Sciences
/ Links
/ Male
/ Medical research
/ Medicine
/ Membrane Proteins - genetics
/ Men
/ Menarche
/ Menarche - genetics
/ Mens health
/ Neoplasms - genetics
/ Obstetrics
/ Polygenic inheritance
/ Polymorphism, Single Nucleotide
/ Preadipocyte factor 1
/ Prostate cancer
/ Puberty
/ Puberty - genetics
/ Public health
/ Quantitative Trait Loci
/ Randomization
/ Ribonucleoproteins - genetics
/ Risk
/ Risk Factors
/ Studies
/ Time measurement
/ Transcription
/ Trends
/ Ubiquitin-Protein Ligases
/ Variance
/ Womens health
2017
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Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
by
Paternoster, Lavinia
, Broer, Linda
, Eriksson, Johan G
, Hottenga, Jouke J
, Luan, Jian'an
, Couch, Fergus J
, Andrulis, Irene L
, Sarkar, Abhishek K
, Nutile, Teresa
, Harris, Tamara B
, Gandin, Ilaria
, McCarthy, Mark I
, van Dijk, Ko Willems
, Stolk, Lisette
, Bolla, Manjeet K
, Nalls, Mike A
, Guénel, Pascal
, Peters, Annette
, Pedersen, Nancy
, Robino, Antonietta
, Altmaier, Elisabeth
, Benitez, Javier
, Brand, Judith S
, Navarro, Pau
, Wang, Qin
, Ruggiero, Daniela
, Boutin, Thibaud
, Uitterlinden, André G
, Campbell, Harry
, Lenarduzzi, Stefania
, Murray, Anna
, Bochud, Murielle
, Langenberg, Claudia
, Beckmann, Matthias W
, Boerwinkle, Eric
, Kutalik, Zoltan
, Davey Smith, George
, Gudbjartsson, Daniel F
, Czene, Kamila
, Ferrucci, Luigi
, Magnusson, Patrik K E
, Lind, Penelope A
, Rahman, Iffat
, Dunning, Alison M
, Catamo, Eulalia
, Rose, Lynda M
, LaChance, Genevieve
, Timpson, Nicholas J
, Helgason, Hannes
, Smith, Albert V
, Launer, Lenore J
, Palotie, Aarno
, Price, Alkes L
, Meisinger, Christa
, Ulivi, Sheila
, Lunetta, Kathryn L
, Porteous, David
, Hamann, Ute
, Edwards, Digna R Velez
, Medland, Sarah E
, Pouta, Anneli
, Dennis, Joe
, Wareham, Nichola
in
45/43
/ 631/208/205/2138
/ 692/699/2732
/ 692/699/67
/ Adolescent
/ Age
/ Age Factors
/ Agriculture
/ Animal Genetics and Genomics
/ Biomedicine
/ Body mass
/ Body Mass Index
/ Breast
/ Breast cancer
/ Calcium-Binding Proteins
/ Cancer
/ Cancer Research
/ Carcinogenesis
/ Children
/ Coding
/ Complexity
/ Databases, Genetic
/ Diseases
/ Endocrinology
/ Endometrial cancer
/ Endometrium
/ Enrichment
/ Epidemiology
/ Female
/ Gene expression
/ Gene Function
/ Genes
/ Genetic aspects
/ Genetic Predisposition to Disease
/ Genetic variation
/ Genetics
/ Genome-Wide Association Study
/ Genomes
/ Genomic analysis
/ Genomic Imprinting
/ Genomics
/ Gynecology
/ Health aspects
/ Health risks
/ Heritability
/ Hospitals
/ Human Genetics
/ Humans
/ Intercellular Signaling Peptides and Proteins - genetics
/ Internal medicine
/ Laboratories
/ Life Sciences
/ Links
/ Male
/ Medical research
/ Medicine
/ Membrane Proteins - genetics
/ Men
/ Menarche
/ Menarche - genetics
/ Mens health
/ Neoplasms - genetics
/ Obstetrics
/ Polygenic inheritance
/ Polymorphism, Single Nucleotide
/ Preadipocyte factor 1
/ Prostate cancer
/ Puberty
/ Puberty - genetics
/ Public health
/ Quantitative Trait Loci
/ Randomization
/ Ribonucleoproteins - genetics
/ Risk
/ Risk Factors
/ Studies
/ Time measurement
/ Transcription
/ Trends
/ Ubiquitin-Protein Ligases
/ Variance
/ Womens health
2017
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Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
by
Paternoster, Lavinia
, Broer, Linda
, Eriksson, Johan G
, Hottenga, Jouke J
, Luan, Jian'an
, Couch, Fergus J
, Andrulis, Irene L
, Sarkar, Abhishek K
, Nutile, Teresa
, Harris, Tamara B
, Gandin, Ilaria
, McCarthy, Mark I
, van Dijk, Ko Willems
, Stolk, Lisette
, Bolla, Manjeet K
, Nalls, Mike A
, Guénel, Pascal
, Peters, Annette
, Pedersen, Nancy
, Robino, Antonietta
, Altmaier, Elisabeth
, Benitez, Javier
, Brand, Judith S
, Navarro, Pau
, Wang, Qin
, Ruggiero, Daniela
, Boutin, Thibaud
, Uitterlinden, André G
, Campbell, Harry
, Lenarduzzi, Stefania
, Murray, Anna
, Bochud, Murielle
, Langenberg, Claudia
, Beckmann, Matthias W
, Boerwinkle, Eric
, Kutalik, Zoltan
, Davey Smith, George
, Gudbjartsson, Daniel F
, Czene, Kamila
, Ferrucci, Luigi
, Magnusson, Patrik K E
, Lind, Penelope A
, Rahman, Iffat
, Dunning, Alison M
, Catamo, Eulalia
, Rose, Lynda M
, LaChance, Genevieve
, Timpson, Nicholas J
, Helgason, Hannes
, Smith, Albert V
, Launer, Lenore J
, Palotie, Aarno
, Price, Alkes L
, Meisinger, Christa
, Ulivi, Sheila
, Lunetta, Kathryn L
, Porteous, David
, Hamann, Ute
, Edwards, Digna R Velez
, Medland, Sarah E
, Pouta, Anneli
, Dennis, Joe
, Wareham, Nichola
in
45/43
/ 631/208/205/2138
/ 692/699/2732
/ 692/699/67
/ Adolescent
/ Age
/ Age Factors
/ Agriculture
/ Animal Genetics and Genomics
/ Biomedicine
/ Body mass
/ Body Mass Index
/ Breast
/ Breast cancer
/ Calcium-Binding Proteins
/ Cancer
/ Cancer Research
/ Carcinogenesis
/ Children
/ Coding
/ Complexity
/ Databases, Genetic
/ Diseases
/ Endocrinology
/ Endometrial cancer
/ Endometrium
/ Enrichment
/ Epidemiology
/ Female
/ Gene expression
/ Gene Function
/ Genes
/ Genetic aspects
/ Genetic Predisposition to Disease
/ Genetic variation
/ Genetics
/ Genome-Wide Association Study
/ Genomes
/ Genomic analysis
/ Genomic Imprinting
/ Genomics
/ Gynecology
/ Health aspects
/ Health risks
/ Heritability
/ Hospitals
/ Human Genetics
/ Humans
/ Intercellular Signaling Peptides and Proteins - genetics
/ Internal medicine
/ Laboratories
/ Life Sciences
/ Links
/ Male
/ Medical research
/ Medicine
/ Membrane Proteins - genetics
/ Men
/ Menarche
/ Menarche - genetics
/ Mens health
/ Neoplasms - genetics
/ Obstetrics
/ Polygenic inheritance
/ Polymorphism, Single Nucleotide
/ Preadipocyte factor 1
/ Prostate cancer
/ Puberty
/ Puberty - genetics
/ Public health
/ Quantitative Trait Loci
/ Randomization
/ Ribonucleoproteins - genetics
/ Risk
/ Risk Factors
/ Studies
/ Time measurement
/ Transcription
/ Trends
/ Ubiquitin-Protein Ligases
/ Variance
/ Womens health
2017
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Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
Journal Article
Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
2017
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Overview
John Perry, Ken Ong and colleagues analyze genotype data on ∼370,000 women and identify 389 independent signals that associate with age at menarche, implicating ∼250 genes. Their analyses suggest causal inverse associations, independent of BMI, between puberty timing and risks for breast and endometrial cancers in women and prostate cancer in men.
The timing of puberty is a highly polygenic childhood trait that is epidemiologically associated with various adult diseases. Using 1000 Genomes Project–imputed genotype data in up to ∼370,000 women, we identify 389 independent signals (
P
< 5 × 10
−8
) for age at menarche, a milestone in female pubertal development. In Icelandic data, these signals explain ∼7.4% of the population variance in age at menarche, corresponding to ∼25% of the estimated heritability. We implicate ∼250 genes via coding variation or associated expression, demonstrating significant enrichment in neural tissues. Rare variants near the imprinted genes
MKRN3
and
DLK1
were identified, exhibiting large effects when paternally inherited. Mendelian randomization analyses suggest causal inverse associations, independent of body mass index (BMI), between puberty timing and risks for breast and endometrial cancers in women and prostate cancer in men. In aggregate, our findings highlight the complexity of the genetic regulation of puberty timing and support causal links with cancer susceptibility.
Publisher
Nature Publishing Group US,Nature Publishing Group
Subject
/ Age
/ Animal Genetics and Genomics
/ Breast
/ Cancer
/ Children
/ Coding
/ Diseases
/ Female
/ Genes
/ Genetic Predisposition to Disease
/ Genetics
/ Genome-Wide Association Study
/ Genomes
/ Genomics
/ Humans
/ Intercellular Signaling Peptides and Proteins - genetics
/ Links
/ Male
/ Medicine
/ Membrane Proteins - genetics
/ Men
/ Menarche
/ Polymorphism, Single Nucleotide
/ Puberty
/ Ribonucleoproteins - genetics
/ Risk
/ Studies
/ Trends
/ Variance
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