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Ex vivo RSA and pfkelch13 targeted-amplicon deep sequencing reveal parasites susceptibility to artemisinin in Senegal, 2017
by
Gaye, Amy
, Bei, Amy Kristine
, Ndiaye, Daouda
, Coppée, Romain
, Diallo, Mamadou Alpha
, Mbaye, Aminata
, Diédhiou, Younouss
, Fall, Awa
, Tine, Abdoulaye
, Garba, Mamane Nassirou
, Mbaye, Amadou Mactar
, Bailly, Justine
, Thiaw, Alphonse Birane
, Ménard, Didier
, Ndiaye, Ibrahima Mbaye
, Ndiaye, Tolla
, Mama, Atikatou
, Doderer-Lang, Cécile
, Yade, Mamadou Samb
, Diongue, Khadim
, Dièye, Baba
in
Analysis
/ Animals
/ Antimalarials - pharmacology
/ Antimalarials - therapeutic use
/ Artemisinin
/ Artemisinin partial resistance
/ Artemisinins - pharmacology
/ Artemisinins - therapeutic use
/ Biomedical and Life Sciences
/ Biomedicine
/ Consent
/ Control
/ Dihydroartemisinin
/ Disease susceptibility
/ DNA sequencing
/ Drug Resistance - genetics
/ Entomology
/ Genetic testing
/ High-Throughput Nucleotide Sequencing
/ Human diseases
/ Humans
/ Identification and classification
/ Infectious Diseases
/ Life Sciences
/ Malaria
/ Malaria, Falciparum - parasitology
/ Microbiology
/ Mutation
/ Nucleotide sequencing
/ Parasite resistance
/ Parasites
/ Parasitology
/ Pfkelch13 genotype
/ Plasmodium falciparum
/ Prevention
/ Protozoan Proteins - genetics
/ Protozoan Proteins - therapeutic use
/ Public Health
/ Ring-stage Survival Assay
/ Risk factors
/ Senegal
/ Sequencing
/ Survival
/ Targeted-amplicon deep sequencing
/ Tropical Medicine
/ Uganda
/ Vector-borne diseases
2023
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Ex vivo RSA and pfkelch13 targeted-amplicon deep sequencing reveal parasites susceptibility to artemisinin in Senegal, 2017
by
Gaye, Amy
, Bei, Amy Kristine
, Ndiaye, Daouda
, Coppée, Romain
, Diallo, Mamadou Alpha
, Mbaye, Aminata
, Diédhiou, Younouss
, Fall, Awa
, Tine, Abdoulaye
, Garba, Mamane Nassirou
, Mbaye, Amadou Mactar
, Bailly, Justine
, Thiaw, Alphonse Birane
, Ménard, Didier
, Ndiaye, Ibrahima Mbaye
, Ndiaye, Tolla
, Mama, Atikatou
, Doderer-Lang, Cécile
, Yade, Mamadou Samb
, Diongue, Khadim
, Dièye, Baba
in
Analysis
/ Animals
/ Antimalarials - pharmacology
/ Antimalarials - therapeutic use
/ Artemisinin
/ Artemisinin partial resistance
/ Artemisinins - pharmacology
/ Artemisinins - therapeutic use
/ Biomedical and Life Sciences
/ Biomedicine
/ Consent
/ Control
/ Dihydroartemisinin
/ Disease susceptibility
/ DNA sequencing
/ Drug Resistance - genetics
/ Entomology
/ Genetic testing
/ High-Throughput Nucleotide Sequencing
/ Human diseases
/ Humans
/ Identification and classification
/ Infectious Diseases
/ Life Sciences
/ Malaria
/ Malaria, Falciparum - parasitology
/ Microbiology
/ Mutation
/ Nucleotide sequencing
/ Parasite resistance
/ Parasites
/ Parasitology
/ Pfkelch13 genotype
/ Plasmodium falciparum
/ Prevention
/ Protozoan Proteins - genetics
/ Protozoan Proteins - therapeutic use
/ Public Health
/ Ring-stage Survival Assay
/ Risk factors
/ Senegal
/ Sequencing
/ Survival
/ Targeted-amplicon deep sequencing
/ Tropical Medicine
/ Uganda
/ Vector-borne diseases
2023
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Ex vivo RSA and pfkelch13 targeted-amplicon deep sequencing reveal parasites susceptibility to artemisinin in Senegal, 2017
by
Gaye, Amy
, Bei, Amy Kristine
, Ndiaye, Daouda
, Coppée, Romain
, Diallo, Mamadou Alpha
, Mbaye, Aminata
, Diédhiou, Younouss
, Fall, Awa
, Tine, Abdoulaye
, Garba, Mamane Nassirou
, Mbaye, Amadou Mactar
, Bailly, Justine
, Thiaw, Alphonse Birane
, Ménard, Didier
, Ndiaye, Ibrahima Mbaye
, Ndiaye, Tolla
, Mama, Atikatou
, Doderer-Lang, Cécile
, Yade, Mamadou Samb
, Diongue, Khadim
, Dièye, Baba
in
Analysis
/ Animals
/ Antimalarials - pharmacology
/ Antimalarials - therapeutic use
/ Artemisinin
/ Artemisinin partial resistance
/ Artemisinins - pharmacology
/ Artemisinins - therapeutic use
/ Biomedical and Life Sciences
/ Biomedicine
/ Consent
/ Control
/ Dihydroartemisinin
/ Disease susceptibility
/ DNA sequencing
/ Drug Resistance - genetics
/ Entomology
/ Genetic testing
/ High-Throughput Nucleotide Sequencing
/ Human diseases
/ Humans
/ Identification and classification
/ Infectious Diseases
/ Life Sciences
/ Malaria
/ Malaria, Falciparum - parasitology
/ Microbiology
/ Mutation
/ Nucleotide sequencing
/ Parasite resistance
/ Parasites
/ Parasitology
/ Pfkelch13 genotype
/ Plasmodium falciparum
/ Prevention
/ Protozoan Proteins - genetics
/ Protozoan Proteins - therapeutic use
/ Public Health
/ Ring-stage Survival Assay
/ Risk factors
/ Senegal
/ Sequencing
/ Survival
/ Targeted-amplicon deep sequencing
/ Tropical Medicine
/ Uganda
/ Vector-borne diseases
2023
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Ex vivo RSA and pfkelch13 targeted-amplicon deep sequencing reveal parasites susceptibility to artemisinin in Senegal, 2017
Journal Article
Ex vivo RSA and pfkelch13 targeted-amplicon deep sequencing reveal parasites susceptibility to artemisinin in Senegal, 2017
2023
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Overview
Background
Malaria control is highly dependent on the effectiveness of artemisinin-based combination therapy (ACT), the current frontline malaria curative treatment. Unfortunately, the emergence and spread of parasites resistant to artemisinin (ART) derivatives in Southeast Asia and South America, and more recently in Rwanda and Uganda (East Africa), compromise their long-term use in sub-Saharan Africa, where most malaria deaths occur.
Methods
Here, ex vivo susceptibility to dihydroartemisinin (DHA) was evaluated from 38
Plasmodium falciparum
isolates collected in 2017 in Thiès (Senegal) expressed in the Ring-stage Survival Assay (RSA). Both major and minor variants were explored in the three conserved-encoding domains of the
pfkelch13
gene, the main determinant of ART resistance using a targeted-amplicon deep sequencing (TADS) approach.
Results
All samples tested in the ex vivo RSA were found to be susceptible to DHA (parasite survival rate < 1%). The non-synonymous mutations K189T and K248R in
pfkelch13
were observed each in one isolate, as major (99%) or minor (5%) variants, respectively.
Conclusion
The results suggest that ART is still fully effective in the Thiès region of Senegal in 2017. Investigations combining ex vivo RSA and TADS are a useful approach for monitoring ART resistance in Africa.
Publisher
BioMed Central,BioMed Central Ltd,Springer Nature B.V,BMC
Subject
/ Animals
/ Antimalarials - pharmacology
/ Antimalarials - therapeutic use
/ Artemisinin partial resistance
/ Artemisinins - therapeutic use
/ Biomedical and Life Sciences
/ Consent
/ Control
/ High-Throughput Nucleotide Sequencing
/ Humans
/ Identification and classification
/ Malaria
/ Malaria, Falciparum - parasitology
/ Mutation
/ Protozoan Proteins - genetics
/ Protozoan Proteins - therapeutic use
/ Senegal
/ Survival
/ Targeted-amplicon deep sequencing
/ Uganda
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