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Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt
by
Osborne, James M.
, Romijn, Lotte B.
, Almet, Axel A.
, Tan, Chin Wee
in
Algorithms
/ Analysis
/ Analysis and modelling of complex systems
/ Bioinformatics
/ Biomedical and Life Sciences
/ Cell Adhesion
/ Cell adhesion & migration
/ Cell growth
/ Cell migration
/ Cell Movement
/ Cell Proliferation
/ Chaste
/ Colorectal cancer
/ Colorectal Neoplasms - metabolism
/ Colorectal Neoplasms - pathology
/ Complex systems
/ Computational Biology/Bioinformatics
/ Computer Appl. in Life Sciences
/ Crypt
/ Databases, Factual
/ Genetic aspects
/ Humans
/ Kinases
/ Life Sciences
/ Mechanics
/ Microarrays
/ Modelling
/ Models, Biological
/ Multicellular modelling
/ Mutants
/ Mutation
/ Prejudice
/ Research Article
/ SBML
/ Wnt Signaling Pathway
2020
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Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt
by
Osborne, James M.
, Romijn, Lotte B.
, Almet, Axel A.
, Tan, Chin Wee
in
Algorithms
/ Analysis
/ Analysis and modelling of complex systems
/ Bioinformatics
/ Biomedical and Life Sciences
/ Cell Adhesion
/ Cell adhesion & migration
/ Cell growth
/ Cell migration
/ Cell Movement
/ Cell Proliferation
/ Chaste
/ Colorectal cancer
/ Colorectal Neoplasms - metabolism
/ Colorectal Neoplasms - pathology
/ Complex systems
/ Computational Biology/Bioinformatics
/ Computer Appl. in Life Sciences
/ Crypt
/ Databases, Factual
/ Genetic aspects
/ Humans
/ Kinases
/ Life Sciences
/ Mechanics
/ Microarrays
/ Modelling
/ Models, Biological
/ Multicellular modelling
/ Mutants
/ Mutation
/ Prejudice
/ Research Article
/ SBML
/ Wnt Signaling Pathway
2020
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Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt
by
Osborne, James M.
, Romijn, Lotte B.
, Almet, Axel A.
, Tan, Chin Wee
in
Algorithms
/ Analysis
/ Analysis and modelling of complex systems
/ Bioinformatics
/ Biomedical and Life Sciences
/ Cell Adhesion
/ Cell adhesion & migration
/ Cell growth
/ Cell migration
/ Cell Movement
/ Cell Proliferation
/ Chaste
/ Colorectal cancer
/ Colorectal Neoplasms - metabolism
/ Colorectal Neoplasms - pathology
/ Complex systems
/ Computational Biology/Bioinformatics
/ Computer Appl. in Life Sciences
/ Crypt
/ Databases, Factual
/ Genetic aspects
/ Humans
/ Kinases
/ Life Sciences
/ Mechanics
/ Microarrays
/ Modelling
/ Models, Biological
/ Multicellular modelling
/ Mutants
/ Mutation
/ Prejudice
/ Research Article
/ SBML
/ Wnt Signaling Pathway
2020
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Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt
Journal Article
Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt
2020
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Overview
Background
Many cancers arise from mutations in cells within epithelial tissues. Mutations manifesting at the subcellular level influence the structure and function of the tissue resulting in cancer. Previous work has proposed how cell level properties can lead to mutant cell invasion, but has not incorporated detailed subcellular modelling
Results
We present a framework that allows the straightforward integration and simulation of SBML representations of subcellular dynamics within multiscale models of epithelial tissues. This allows us to investigate the effect of mutations in subcellular pathways on the migration of cells within the colorectal crypt. Using multiple models we find that mutations in APC, a key component in the Wnt signalling pathway, can bias neutral drift and can also cause downward invasion of mutant cells in the crypt.
Conclusions
Our framework allows us to investigate how subcellular mutations, i.e. knockouts and knockdowns, affect cell-level properties and the resultant migration of cells within epithelial tissues. In the context of the colorectal crypt, we see that mutations in APC can lead directly to mutant cell invasion.
Publisher
BioMed Central,BioMed Central Ltd,Springer Nature B.V,BMC
Subject
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