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KBase: The United States Department of Energy Systems Biology Knowledgebase
by
Olson, Robert
, Riehl, William J
, Murphy-Olson, Dan
, Conrad, Neal
, Oh, Taeyun
, Sneddon, Michael W
, Kondo, Shinnosuke
, Dubchak, Inna
, Stevens, Rick L
, Yoo, Hyunseung
, Haun, Holly L
, Dietrich, Emily
, Parrello, Bruce
, Chia, Jer-Ming
, Gerlach, Wolfgang
, Colasanti, Ric
, Harris, Nomi L
, Fang, Gang
, Kumari, Sunita
, Greiner, Annette
, Gurtowski, James
, Sutormin, Roman A
, Pasternak, Shiran
, Chivian, Dylan
, Henderson, Matthew L
, Price, Gavin A
, Syed, Mustafa H
, Gerstein, Mark
, Davis, James J
, Faria, José P
, Seaver, Samuel M D
, Weston, David J
, Brenner, Steven E
, Novichkov, Pavel S
, Keegan, Kevin P
, Baumohl, Jason
, Meyer, Folker
, Thomason, James
, Schatz, Michael C
, Kumar, Vivek
, Pearson, Erik
, Best, Aaron A
, Ware, Doreen
, Bowen, Ben
, Jain, Rashmi
, Ranjan, Priya
, Allen, Benjamin H
, Poon, Sarah S
, Yu, Dantong
, Maslov, Sergei
, Gunter, Dan
, Chandonia, John-Marc
, Wang, Daifeng
, Henry, Christopher S
, Arkin, Adam P
, Bun, Christopher C
, Ronald, Pamela C
, Yoo, Shinjae
, Shukla, Maulik
, Brettin, Thomas S
, Drake, Meghan M
, Kamimura, Roy T
, Chan, Stephen Y
, Edirisinghe, Janaka N
, He, Fei
, Devoid, Scott
, Perez, Fernando
, Mills, Marissa
, Dehal, P
in
38/39
/ 45/23
/ 49/91
/ 631/114/129
/ 631/114/2398
/ 631/114/2401
/ 631/114/794
/ Agriculture
/ BASIC BIOLOGICAL SCIENCES
/ Bioinformatics
/ Biology
/ Biomedical Engineering/Biotechnology
/ Biomedicine
/ Biotechnology
/ Collaboration
/ Computational Biology - methods
/ correspondence
/ Data analysis
/ Data models
/ Database Management Systems - trends
/ Energy policy
/ Gene expression
/ Gene sequencing
/ Genomes
/ Genomics
/ Government agencies
/ Humans
/ Knowledge Bases
/ Knowledge bases (artificial intelligence)
/ KNOWLEDGE MANAGEMENT AND PRESERVATION
/ Life Sciences
/ MATHEMATICS AND COMPUTING
/ Metabolism
/ Metabolites
/ Narratives
/ Open source software
/ Organisms
/ Phenotypes
/ Prediction models
/ Reproducibility
/ Software development
/ Systems Biology - trends
/ Technology application
/ United States
/ User interface
2018
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KBase: The United States Department of Energy Systems Biology Knowledgebase
by
Olson, Robert
, Riehl, William J
, Murphy-Olson, Dan
, Conrad, Neal
, Oh, Taeyun
, Sneddon, Michael W
, Kondo, Shinnosuke
, Dubchak, Inna
, Stevens, Rick L
, Yoo, Hyunseung
, Haun, Holly L
, Dietrich, Emily
, Parrello, Bruce
, Chia, Jer-Ming
, Gerlach, Wolfgang
, Colasanti, Ric
, Harris, Nomi L
, Fang, Gang
, Kumari, Sunita
, Greiner, Annette
, Gurtowski, James
, Sutormin, Roman A
, Pasternak, Shiran
, Chivian, Dylan
, Henderson, Matthew L
, Price, Gavin A
, Syed, Mustafa H
, Gerstein, Mark
, Davis, James J
, Faria, José P
, Seaver, Samuel M D
, Weston, David J
, Brenner, Steven E
, Novichkov, Pavel S
, Keegan, Kevin P
, Baumohl, Jason
, Meyer, Folker
, Thomason, James
, Schatz, Michael C
, Kumar, Vivek
, Pearson, Erik
, Best, Aaron A
, Ware, Doreen
, Bowen, Ben
, Jain, Rashmi
, Ranjan, Priya
, Allen, Benjamin H
, Poon, Sarah S
, Yu, Dantong
, Maslov, Sergei
, Gunter, Dan
, Chandonia, John-Marc
, Wang, Daifeng
, Henry, Christopher S
, Arkin, Adam P
, Bun, Christopher C
, Ronald, Pamela C
, Yoo, Shinjae
, Shukla, Maulik
, Brettin, Thomas S
, Drake, Meghan M
, Kamimura, Roy T
, Chan, Stephen Y
, Edirisinghe, Janaka N
, He, Fei
, Devoid, Scott
, Perez, Fernando
, Mills, Marissa
, Dehal, P
in
38/39
/ 45/23
/ 49/91
/ 631/114/129
/ 631/114/2398
/ 631/114/2401
/ 631/114/794
/ Agriculture
/ BASIC BIOLOGICAL SCIENCES
/ Bioinformatics
/ Biology
/ Biomedical Engineering/Biotechnology
/ Biomedicine
/ Biotechnology
/ Collaboration
/ Computational Biology - methods
/ correspondence
/ Data analysis
/ Data models
/ Database Management Systems - trends
/ Energy policy
/ Gene expression
/ Gene sequencing
/ Genomes
/ Genomics
/ Government agencies
/ Humans
/ Knowledge Bases
/ Knowledge bases (artificial intelligence)
/ KNOWLEDGE MANAGEMENT AND PRESERVATION
/ Life Sciences
/ MATHEMATICS AND COMPUTING
/ Metabolism
/ Metabolites
/ Narratives
/ Open source software
/ Organisms
/ Phenotypes
/ Prediction models
/ Reproducibility
/ Software development
/ Systems Biology - trends
/ Technology application
/ United States
/ User interface
2018
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Do you wish to request the book?
KBase: The United States Department of Energy Systems Biology Knowledgebase
by
Olson, Robert
, Riehl, William J
, Murphy-Olson, Dan
, Conrad, Neal
, Oh, Taeyun
, Sneddon, Michael W
, Kondo, Shinnosuke
, Dubchak, Inna
, Stevens, Rick L
, Yoo, Hyunseung
, Haun, Holly L
, Dietrich, Emily
, Parrello, Bruce
, Chia, Jer-Ming
, Gerlach, Wolfgang
, Colasanti, Ric
, Harris, Nomi L
, Fang, Gang
, Kumari, Sunita
, Greiner, Annette
, Gurtowski, James
, Sutormin, Roman A
, Pasternak, Shiran
, Chivian, Dylan
, Henderson, Matthew L
, Price, Gavin A
, Syed, Mustafa H
, Gerstein, Mark
, Davis, James J
, Faria, José P
, Seaver, Samuel M D
, Weston, David J
, Brenner, Steven E
, Novichkov, Pavel S
, Keegan, Kevin P
, Baumohl, Jason
, Meyer, Folker
, Thomason, James
, Schatz, Michael C
, Kumar, Vivek
, Pearson, Erik
, Best, Aaron A
, Ware, Doreen
, Bowen, Ben
, Jain, Rashmi
, Ranjan, Priya
, Allen, Benjamin H
, Poon, Sarah S
, Yu, Dantong
, Maslov, Sergei
, Gunter, Dan
, Chandonia, John-Marc
, Wang, Daifeng
, Henry, Christopher S
, Arkin, Adam P
, Bun, Christopher C
, Ronald, Pamela C
, Yoo, Shinjae
, Shukla, Maulik
, Brettin, Thomas S
, Drake, Meghan M
, Kamimura, Roy T
, Chan, Stephen Y
, Edirisinghe, Janaka N
, He, Fei
, Devoid, Scott
, Perez, Fernando
, Mills, Marissa
, Dehal, P
in
38/39
/ 45/23
/ 49/91
/ 631/114/129
/ 631/114/2398
/ 631/114/2401
/ 631/114/794
/ Agriculture
/ BASIC BIOLOGICAL SCIENCES
/ Bioinformatics
/ Biology
/ Biomedical Engineering/Biotechnology
/ Biomedicine
/ Biotechnology
/ Collaboration
/ Computational Biology - methods
/ correspondence
/ Data analysis
/ Data models
/ Database Management Systems - trends
/ Energy policy
/ Gene expression
/ Gene sequencing
/ Genomes
/ Genomics
/ Government agencies
/ Humans
/ Knowledge Bases
/ Knowledge bases (artificial intelligence)
/ KNOWLEDGE MANAGEMENT AND PRESERVATION
/ Life Sciences
/ MATHEMATICS AND COMPUTING
/ Metabolism
/ Metabolites
/ Narratives
/ Open source software
/ Organisms
/ Phenotypes
/ Prediction models
/ Reproducibility
/ Software development
/ Systems Biology - trends
/ Technology application
/ United States
/ User interface
2018
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KBase: The United States Department of Energy Systems Biology Knowledgebase
Journal Article
KBase: The United States Department of Energy Systems Biology Knowledgebase
2018
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Overview
The U.S. Department of Energy Systems Biology Knowledgebase (KBase, http://kbase.us) is an open-source software and data platform designed to tackle the grand challenge of systems biology—predicting and designing biological function at scales ranging from the biomolecular to the ecological. KBase is available for anyone to use, and enables researchers to collaboratively generate, test, compare, and share hypotheses about biological functions; perform large analyses on scalable computing infrastructure; and combine experimental evidence and conclusions to model plant and microbial physiology and community dynamics. The KBase platform has extensible analytical capabilities that currently include (meta)genome assembly, annotation, comparative genomics, transcriptomics, and metabolic modeling; a web-based user interface that supports building, sharing, and publishing reproducible and well-annotated analyses with integrated data; and a software development kit that enables the community to add functionality to the system.
Publisher
Springer New York,Nature Publishing Group,Springer Nature,Nature Publishing Group US
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