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Trans-Translation in Helicobacter pylori: Essentiality of Ribosome Rescue and Requirement of Protein Tagging for Stress Resistance and Competence
by
Thibonnier, Marie
, De Reuse, Hilde
, Thiberge, Jean-Michel
in
Aberration
/ Adaptation
/ Antibiotics
/ Bacteria
/ Bacterial Proteins - biosynthesis
/ Bacterial Proteins - genetics
/ Bacterial Proteins - physiology
/ Biodegradation
/ Biopolymers
/ Cell cycle
/ Cloning
/ Codons
/ Degradation
/ Deoxyribonucleic acid
/ DNA
/ E coli
/ Escherichia coli
/ Genetics and Genomics
/ Genomes
/ Helicobacter pylori
/ Helicobacter pylori - chemistry
/ Helicobacter pylori - genetics
/ Helicobacter pylori - physiology
/ Infections
/ Infectious Diseases
/ Laboratories
/ Marking
/ Microbiology
/ Molecular Biology
/ Motility
/ Mutation
/ Oxidative Stress
/ Polypeptides
/ Potassium
/ Protein Biosynthesis
/ Proteins
/ Proteins - metabolism
/ Proteolysis
/ Quality control
/ Ribonucleic acid
/ Ribosomes
/ Ribosomes - metabolism
/ RNA
/ RNA, Bacterial - genetics
/ RNA, Bacterial - physiology
/ RNA-Binding Proteins - genetics
/ RNA-Binding Proteins - physiology
/ Salmonella
/ Stalling
/ Stomach
/ Streptomyces
/ Stress response
/ Stress, Physiological
/ Stresses
/ Studies
/ Tagging
/ TmRNA
/ Translation
/ Vaccines
2008
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Trans-Translation in Helicobacter pylori: Essentiality of Ribosome Rescue and Requirement of Protein Tagging for Stress Resistance and Competence
by
Thibonnier, Marie
, De Reuse, Hilde
, Thiberge, Jean-Michel
in
Aberration
/ Adaptation
/ Antibiotics
/ Bacteria
/ Bacterial Proteins - biosynthesis
/ Bacterial Proteins - genetics
/ Bacterial Proteins - physiology
/ Biodegradation
/ Biopolymers
/ Cell cycle
/ Cloning
/ Codons
/ Degradation
/ Deoxyribonucleic acid
/ DNA
/ E coli
/ Escherichia coli
/ Genetics and Genomics
/ Genomes
/ Helicobacter pylori
/ Helicobacter pylori - chemistry
/ Helicobacter pylori - genetics
/ Helicobacter pylori - physiology
/ Infections
/ Infectious Diseases
/ Laboratories
/ Marking
/ Microbiology
/ Molecular Biology
/ Motility
/ Mutation
/ Oxidative Stress
/ Polypeptides
/ Potassium
/ Protein Biosynthesis
/ Proteins
/ Proteins - metabolism
/ Proteolysis
/ Quality control
/ Ribonucleic acid
/ Ribosomes
/ Ribosomes - metabolism
/ RNA
/ RNA, Bacterial - genetics
/ RNA, Bacterial - physiology
/ RNA-Binding Proteins - genetics
/ RNA-Binding Proteins - physiology
/ Salmonella
/ Stalling
/ Stomach
/ Streptomyces
/ Stress response
/ Stress, Physiological
/ Stresses
/ Studies
/ Tagging
/ TmRNA
/ Translation
/ Vaccines
2008
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Trans-Translation in Helicobacter pylori: Essentiality of Ribosome Rescue and Requirement of Protein Tagging for Stress Resistance and Competence
by
Thibonnier, Marie
, De Reuse, Hilde
, Thiberge, Jean-Michel
in
Aberration
/ Adaptation
/ Antibiotics
/ Bacteria
/ Bacterial Proteins - biosynthesis
/ Bacterial Proteins - genetics
/ Bacterial Proteins - physiology
/ Biodegradation
/ Biopolymers
/ Cell cycle
/ Cloning
/ Codons
/ Degradation
/ Deoxyribonucleic acid
/ DNA
/ E coli
/ Escherichia coli
/ Genetics and Genomics
/ Genomes
/ Helicobacter pylori
/ Helicobacter pylori - chemistry
/ Helicobacter pylori - genetics
/ Helicobacter pylori - physiology
/ Infections
/ Infectious Diseases
/ Laboratories
/ Marking
/ Microbiology
/ Molecular Biology
/ Motility
/ Mutation
/ Oxidative Stress
/ Polypeptides
/ Potassium
/ Protein Biosynthesis
/ Proteins
/ Proteins - metabolism
/ Proteolysis
/ Quality control
/ Ribonucleic acid
/ Ribosomes
/ Ribosomes - metabolism
/ RNA
/ RNA, Bacterial - genetics
/ RNA, Bacterial - physiology
/ RNA-Binding Proteins - genetics
/ RNA-Binding Proteins - physiology
/ Salmonella
/ Stalling
/ Stomach
/ Streptomyces
/ Stress response
/ Stress, Physiological
/ Stresses
/ Studies
/ Tagging
/ TmRNA
/ Translation
/ Vaccines
2008
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Trans-Translation in Helicobacter pylori: Essentiality of Ribosome Rescue and Requirement of Protein Tagging for Stress Resistance and Competence
Journal Article
Trans-Translation in Helicobacter pylori: Essentiality of Ribosome Rescue and Requirement of Protein Tagging for Stress Resistance and Competence
2008
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Overview
The ubiquitous bacterial trans-translation is one of the most studied quality control mechanisms. Trans-translation requires two specific factors, a small RNA SsrA (tmRNA) and a protein co-factor SmpB, to promote the release of ribosomes stalled on defective mRNAs and to add a specific tag sequence to aberrant polypeptides to direct them to degradation pathways. Helicobacter pylori is a pathogen persistently colonizing a hostile niche, the stomach of humans.
We investigated the role of trans-translation in this bacterium well fitted to resist stressful conditions and found that both smpB and ssrA were essential genes. Five mutant versions of ssrA were generated in H. pylori in order to investigate the function of trans-translation in this organism. Mutation of the resume codon that allows the switch of template of the ribosome required for its release was essential in vivo, however a mutant in which this codon was followed by stop codons interrupting the tag sequence was viable. Therefore one round of translation is sufficient to promote the rescue of stalled ribosomes. A mutant expressing a truncated SsrA tag was viable in H. pylori, but affected in competence and tolerance to both oxidative and antibiotic stresses. This demonstrates that control of protein degradation through trans-translation is by itself central in the management of stress conditions and of competence and supports a regulatory role of trans-translation-dependent protein tagging. In addition, the expression of smpB and ssrA was found to be induced upon acid exposure of H. pylori.
We conclude to a central role of trans-translation in H. pylori both for ribosome rescue possibly due to more severe stalling and for protein degradation to recover from stress conditions frequently encountered in the gastric environment. Finally, the essential trans-translation machinery of H. pylori is an excellent specific target for the development of novel antibiotics.
Publisher
Public Library of Science,Public Library of Science (PLoS)
Subject
/ Bacteria
/ Bacterial Proteins - biosynthesis
/ Bacterial Proteins - genetics
/ Bacterial Proteins - physiology
/ Cloning
/ Codons
/ DNA
/ E coli
/ Genomes
/ Helicobacter pylori - chemistry
/ Helicobacter pylori - genetics
/ Helicobacter pylori - physiology
/ Marking
/ Motility
/ Mutation
/ Proteins
/ RNA
/ RNA-Binding Proteins - genetics
/ RNA-Binding Proteins - physiology
/ Stalling
/ Stomach
/ Stresses
/ Studies
/ Tagging
/ TmRNA
/ Vaccines
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