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A multidimensional workflow profiling of allogeneic virus-specific T cell therapies reveals potency-linked signatures
by
Smith, Corey
, Rehan, Sweera
, Dasari, Vijayendra
, Beagley, Leone
, Le, Thuy
, Khanna, Rajiv
, Crooks, Pauline
, Mahajan, Arushi
, Le Texier, Laetitia
, Panikkar, Archana
, Raju, Jyothy
, Ambalathingal, George
, Khaledi, Panteha
, Mukhopadhyay, Pamela
, Srihari, Sriganesh
, Solomon, Matthew
in
13
/ 13/106
/ 13/31
/ 38
/ 38/39
/ 631/250/1619/554/1775
/ 631/250/2152/1566/1571
/ 631/250/2502
/ 631/250/251
/ 631/326/596/1553
/ Animal models
/ Animals
/ Antigens
/ Antiviral agents
/ B-cell lymphoma
/ Biomarkers
/ Cell therapy
/ Clinical trials
/ Cytokines
/ Cytomegalovirus
/ Cytotoxicity
/ Dimensional analysis
/ Effectiveness
/ Epstein-Barr virus
/ Epstein-Barr Virus Infections - immunology
/ Epstein-Barr Virus Infections - therapy
/ Flow cytometry
/ Gene expression
/ Gene Expression Profiling
/ Graft versus host disease
/ Herpesvirus 4, Human - immunology
/ Humanities and Social Sciences
/ Humans
/ Immunotherapy, Adoptive - methods
/ Lymphocytes
/ Lymphocytes T
/ Lymphoma
/ Lymphoma, B-Cell - immunology
/ Lymphoma, B-Cell - therapy
/ Lymphoma, B-Cell - virology
/ Mice
/ multidisciplinary
/ Peptides
/ Receptors, Antigen, T-Cell - genetics
/ Receptors, Antigen, T-Cell - immunology
/ Receptors, Antigen, T-Cell - metabolism
/ Science
/ Science (multidisciplinary)
/ T cell receptors
/ T-Lymphocytes - immunology
/ T-Lymphocytes - transplantation
/ Therapeutic applications
/ Transcriptomics
/ Transplants & implants
/ Viruses
/ Workflow
2026
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A multidimensional workflow profiling of allogeneic virus-specific T cell therapies reveals potency-linked signatures
by
Smith, Corey
, Rehan, Sweera
, Dasari, Vijayendra
, Beagley, Leone
, Le, Thuy
, Khanna, Rajiv
, Crooks, Pauline
, Mahajan, Arushi
, Le Texier, Laetitia
, Panikkar, Archana
, Raju, Jyothy
, Ambalathingal, George
, Khaledi, Panteha
, Mukhopadhyay, Pamela
, Srihari, Sriganesh
, Solomon, Matthew
in
13
/ 13/106
/ 13/31
/ 38
/ 38/39
/ 631/250/1619/554/1775
/ 631/250/2152/1566/1571
/ 631/250/2502
/ 631/250/251
/ 631/326/596/1553
/ Animal models
/ Animals
/ Antigens
/ Antiviral agents
/ B-cell lymphoma
/ Biomarkers
/ Cell therapy
/ Clinical trials
/ Cytokines
/ Cytomegalovirus
/ Cytotoxicity
/ Dimensional analysis
/ Effectiveness
/ Epstein-Barr virus
/ Epstein-Barr Virus Infections - immunology
/ Epstein-Barr Virus Infections - therapy
/ Flow cytometry
/ Gene expression
/ Gene Expression Profiling
/ Graft versus host disease
/ Herpesvirus 4, Human - immunology
/ Humanities and Social Sciences
/ Humans
/ Immunotherapy, Adoptive - methods
/ Lymphocytes
/ Lymphocytes T
/ Lymphoma
/ Lymphoma, B-Cell - immunology
/ Lymphoma, B-Cell - therapy
/ Lymphoma, B-Cell - virology
/ Mice
/ multidisciplinary
/ Peptides
/ Receptors, Antigen, T-Cell - genetics
/ Receptors, Antigen, T-Cell - immunology
/ Receptors, Antigen, T-Cell - metabolism
/ Science
/ Science (multidisciplinary)
/ T cell receptors
/ T-Lymphocytes - immunology
/ T-Lymphocytes - transplantation
/ Therapeutic applications
/ Transcriptomics
/ Transplants & implants
/ Viruses
/ Workflow
2026
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A multidimensional workflow profiling of allogeneic virus-specific T cell therapies reveals potency-linked signatures
by
Smith, Corey
, Rehan, Sweera
, Dasari, Vijayendra
, Beagley, Leone
, Le, Thuy
, Khanna, Rajiv
, Crooks, Pauline
, Mahajan, Arushi
, Le Texier, Laetitia
, Panikkar, Archana
, Raju, Jyothy
, Ambalathingal, George
, Khaledi, Panteha
, Mukhopadhyay, Pamela
, Srihari, Sriganesh
, Solomon, Matthew
in
13
/ 13/106
/ 13/31
/ 38
/ 38/39
/ 631/250/1619/554/1775
/ 631/250/2152/1566/1571
/ 631/250/2502
/ 631/250/251
/ 631/326/596/1553
/ Animal models
/ Animals
/ Antigens
/ Antiviral agents
/ B-cell lymphoma
/ Biomarkers
/ Cell therapy
/ Clinical trials
/ Cytokines
/ Cytomegalovirus
/ Cytotoxicity
/ Dimensional analysis
/ Effectiveness
/ Epstein-Barr virus
/ Epstein-Barr Virus Infections - immunology
/ Epstein-Barr Virus Infections - therapy
/ Flow cytometry
/ Gene expression
/ Gene Expression Profiling
/ Graft versus host disease
/ Herpesvirus 4, Human - immunology
/ Humanities and Social Sciences
/ Humans
/ Immunotherapy, Adoptive - methods
/ Lymphocytes
/ Lymphocytes T
/ Lymphoma
/ Lymphoma, B-Cell - immunology
/ Lymphoma, B-Cell - therapy
/ Lymphoma, B-Cell - virology
/ Mice
/ multidisciplinary
/ Peptides
/ Receptors, Antigen, T-Cell - genetics
/ Receptors, Antigen, T-Cell - immunology
/ Receptors, Antigen, T-Cell - metabolism
/ Science
/ Science (multidisciplinary)
/ T cell receptors
/ T-Lymphocytes - immunology
/ T-Lymphocytes - transplantation
/ Therapeutic applications
/ Transcriptomics
/ Transplants & implants
/ Viruses
/ Workflow
2026
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A multidimensional workflow profiling of allogeneic virus-specific T cell therapies reveals potency-linked signatures
Journal Article
A multidimensional workflow profiling of allogeneic virus-specific T cell therapies reveals potency-linked signatures
2026
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Overview
Allogeneic virus-specific T cell (VST) therapies offer distinct advantages, including scalability, rapid deployment, and manufacturing consistency, and have demonstrated efficacy in multiple clinical trials. However, identifying VST products with high therapeutic potential remains a major hurdle. Here, we present a multidimensional analytical platform that integrates in vitro and in vivo anti-viral reactivity, T cell receptor (TCR) repertoire analysis, gene expression profiling, immunophenotyping, and functional validation in a humanized mouse model. Epstein-Barr virus (EBV)-specific T cells expanded from HLA-diverse healthy donors consistently enriched for TCRs targeting EBV-encoded antigens. Transcriptomic and high-dimensional flow cytometric analyses revealed a distinct effector-associated signature. Importantly, this integrative approach uncovered correlative biomarkers of T cell potency and effector function, validated in an in vivo model of EBV-driven B cell lymphoma. These findings establish a scalable framework for the characterization of allogeneic T cell products and may inform the development of predictive metrics for in vivo efficacy.
Allogeneic T cell therapies could be used in therapeutic applications because of their potential for ‘off-the-shelf’ access and standardised production. Here the authors have developed a multidimensional workflow profiling platform for EBV-specific T cell therapy and show that correlative biomarkers of T cell potency and effector function are associated with therapeutic effectiveness in xenogeneic mouse EBV-LCL models.
Publisher
Nature Publishing Group UK,Nature Publishing Group,Nature Portfolio
Subject
/ 13/106
/ 13/31
/ 38
/ 38/39
/ Animals
/ Antigens
/ Epstein-Barr Virus Infections - immunology
/ Epstein-Barr Virus Infections - therapy
/ Herpesvirus 4, Human - immunology
/ Humanities and Social Sciences
/ Humans
/ Immunotherapy, Adoptive - methods
/ Lymphoma
/ Lymphoma, B-Cell - immunology
/ Mice
/ Peptides
/ Receptors, Antigen, T-Cell - genetics
/ Receptors, Antigen, T-Cell - immunology
/ Receptors, Antigen, T-Cell - metabolism
/ Science
/ T-Lymphocytes - transplantation
/ Viruses
/ Workflow
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