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Multi-omics analysis reveals COVID-19 vaccine induced attenuation of inflammatory responses during breakthrough disease
by
Bibi, Sagida
, O’Connor, Daniel
, Lambe, Teresa
, Chelysheva, Irina
, Phillips, Daniel
, Sanders, Katherine
, Klenerman, Paul
, Drury, Ruth E.
, Gilbert, Sarah C.
, Emary, Katherine
, Voysey, Merryn
, Pollard, Andrew J.
, Felle, Salle
, Camara, Susana
, Ferreira, Daniela M.
in
38
/ 38/91
/ 631/1647/2217/2018
/ 631/326/590
/ 631/326/596/4130
/ 692/699/255/2514
/ Adult
/ Attenuation
/ Breakthrough Infections
/ ChAdOx1 nCoV-19
/ COVID-19
/ COVID-19 - immunology
/ COVID-19 - prevention & control
/ COVID-19 vaccines
/ COVID-19 Vaccines - administration & dosage
/ COVID-19 Vaccines - immunology
/ Cytokines - blood
/ Disease control
/ Down-regulation
/ Female
/ Gene expression
/ Gene sequencing
/ Humanities and Social Sciences
/ Humans
/ Immune response
/ Immunization
/ Immunoassays
/ Inflammation - immunology
/ Inflammatory response
/ Lymphocytes T
/ Male
/ MicroRNAs
/ Middle Aged
/ miRNA
/ multidisciplinary
/ Multiomics
/ Placebos
/ Proteins
/ Ribonucleic acid
/ RNA
/ SARS-CoV-2 - immunology
/ Science
/ Science (multidisciplinary)
/ Serum proteins
/ Severe acute respiratory syndrome coronavirus 2
/ Signs and symptoms
/ Transcriptome
/ Transcriptomes
/ Vaccination
/ Vaccines
/ Viral diseases
2024
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Multi-omics analysis reveals COVID-19 vaccine induced attenuation of inflammatory responses during breakthrough disease
by
Bibi, Sagida
, O’Connor, Daniel
, Lambe, Teresa
, Chelysheva, Irina
, Phillips, Daniel
, Sanders, Katherine
, Klenerman, Paul
, Drury, Ruth E.
, Gilbert, Sarah C.
, Emary, Katherine
, Voysey, Merryn
, Pollard, Andrew J.
, Felle, Salle
, Camara, Susana
, Ferreira, Daniela M.
in
38
/ 38/91
/ 631/1647/2217/2018
/ 631/326/590
/ 631/326/596/4130
/ 692/699/255/2514
/ Adult
/ Attenuation
/ Breakthrough Infections
/ ChAdOx1 nCoV-19
/ COVID-19
/ COVID-19 - immunology
/ COVID-19 - prevention & control
/ COVID-19 vaccines
/ COVID-19 Vaccines - administration & dosage
/ COVID-19 Vaccines - immunology
/ Cytokines - blood
/ Disease control
/ Down-regulation
/ Female
/ Gene expression
/ Gene sequencing
/ Humanities and Social Sciences
/ Humans
/ Immune response
/ Immunization
/ Immunoassays
/ Inflammation - immunology
/ Inflammatory response
/ Lymphocytes T
/ Male
/ MicroRNAs
/ Middle Aged
/ miRNA
/ multidisciplinary
/ Multiomics
/ Placebos
/ Proteins
/ Ribonucleic acid
/ RNA
/ SARS-CoV-2 - immunology
/ Science
/ Science (multidisciplinary)
/ Serum proteins
/ Severe acute respiratory syndrome coronavirus 2
/ Signs and symptoms
/ Transcriptome
/ Transcriptomes
/ Vaccination
/ Vaccines
/ Viral diseases
2024
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Multi-omics analysis reveals COVID-19 vaccine induced attenuation of inflammatory responses during breakthrough disease
by
Bibi, Sagida
, O’Connor, Daniel
, Lambe, Teresa
, Chelysheva, Irina
, Phillips, Daniel
, Sanders, Katherine
, Klenerman, Paul
, Drury, Ruth E.
, Gilbert, Sarah C.
, Emary, Katherine
, Voysey, Merryn
, Pollard, Andrew J.
, Felle, Salle
, Camara, Susana
, Ferreira, Daniela M.
in
38
/ 38/91
/ 631/1647/2217/2018
/ 631/326/590
/ 631/326/596/4130
/ 692/699/255/2514
/ Adult
/ Attenuation
/ Breakthrough Infections
/ ChAdOx1 nCoV-19
/ COVID-19
/ COVID-19 - immunology
/ COVID-19 - prevention & control
/ COVID-19 vaccines
/ COVID-19 Vaccines - administration & dosage
/ COVID-19 Vaccines - immunology
/ Cytokines - blood
/ Disease control
/ Down-regulation
/ Female
/ Gene expression
/ Gene sequencing
/ Humanities and Social Sciences
/ Humans
/ Immune response
/ Immunization
/ Immunoassays
/ Inflammation - immunology
/ Inflammatory response
/ Lymphocytes T
/ Male
/ MicroRNAs
/ Middle Aged
/ miRNA
/ multidisciplinary
/ Multiomics
/ Placebos
/ Proteins
/ Ribonucleic acid
/ RNA
/ SARS-CoV-2 - immunology
/ Science
/ Science (multidisciplinary)
/ Serum proteins
/ Severe acute respiratory syndrome coronavirus 2
/ Signs and symptoms
/ Transcriptome
/ Transcriptomes
/ Vaccination
/ Vaccines
/ Viral diseases
2024
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Multi-omics analysis reveals COVID-19 vaccine induced attenuation of inflammatory responses during breakthrough disease
Journal Article
Multi-omics analysis reveals COVID-19 vaccine induced attenuation of inflammatory responses during breakthrough disease
2024
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Overview
The immune mechanisms mediating COVID-19 vaccine attenuation of COVID-19 remain undescribed. We conducted comprehensive analyses detailing immune responses to SARS-CoV-2 virus in blood post-vaccination with ChAdOx1 nCoV-19 or a placebo. Samples from randomised placebo-controlled trials (NCT04324606 and NCT04400838) were taken at baseline, onset of COVID-19-like symptoms, and 7 days later, confirming COVID-19 using nucleic amplification test (NAAT test) via real-time PCR (RT-PCR). Serum cytokines were measured with multiplexed immunoassays. The transcriptome was analysed with long, short and small RNA sequencing. We found attenuation of RNA inflammatory signatures in ChAdOx1 nCoV-19 compared with placebo vaccinees and reduced levels of serum proteins associated with COVID-19 severity.
KREMEN1
, a putative alternative SARS-CoV-2 receptor, was downregulated in placebo compared with ChAdOx1 nCoV-19 vaccinees. Vaccination ameliorates reductions in cell counts across leukocyte populations and platelets noted at COVID-19 onset, without inducing potentially deleterious Th2-skewed immune responses. Multi-omics integration links a global reduction in miRNA expression at COVID-19 onset to increased pro-inflammatory responses at the mRNA level. This study reveals insights into the role of COVID-19 vaccines in mitigating disease severity by abrogating pro-inflammatory responses associated with severe COVID-19, affirming vaccine-mediated benefit in breakthrough infection, and highlighting the importance of clinically relevant endpoints in vaccine evaluation.
Here, Drury et al study gene, microRNA and protein expression during COVID-19, in a randomised controlled trial of ChAdOx1 nCoV19 vaccine and find that ChAdOx1 nCoV-19 attenuates the inflammatory response, thought to be the basis for severe COVID-19.
Publisher
Nature Publishing Group UK,Nature Publishing Group,Nature Portfolio
Subject
/ 38/91
/ Adult
/ COVID-19
/ COVID-19 - prevention & control
/ COVID-19 Vaccines - administration & dosage
/ COVID-19 Vaccines - immunology
/ Female
/ Humanities and Social Sciences
/ Humans
/ Male
/ miRNA
/ Placebos
/ Proteins
/ RNA
/ Science
/ Severe acute respiratory syndrome coronavirus 2
/ Vaccines
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