Journal Article

The contribution of seasonal variations and Zostera marina presence to the bacterial community assembly of seagrass bed sediments

Wang, Hongzhen, Xin, Jiayi, Tang, Xuexi, Xue, Song, Li, Xinqi, Chen, Jun, Zang, Yu, Tang, Liuqing

2024

Overview

Background Microorganisms play pivotal roles in seagrass ecosystems by facilitating material and elemental cycling as well as energy flux. However, our understanding of how seasonal factors and seagrass presence influence the assembly of bacterial communities in seagrass bed sediments is limited. Employing high-throughput sequencing techniques, this study investigates and characterizes bacterial communities in the rhizosphere of eelgrass ( Zostera marina ) and the bulk sediments across different seasons. The research elucidates information on the significance of seasonal variations and seagrass presence in impacting the microbial communities associated with Zostera marina . Results The results indicate that seasonal variations have a more significant impact on the bacterial community in seagrass bed sediments than the presence of seagrass. We observed that the assembly of bacterial communities in bulk sediments primarily occurs through stochastic processes. However, the presence of seagrass leading to a transition from stochastic to deterministic processes in bacterial community assembly. This shift further impacts the complexity and stability of the bacterial co-occurrence network. Through LEfSe analysis, different candidate biomarkers were identified in the bacterial communities of rhizosphere sediments in different seasons, indicating that seagrass may possess adaptive capabilities to the environment during different stages of growth and development. Conclusions Seasonal variations play a significant role in shaping these communities, while seagrass presence influences the assembly processes and stability of the bacterial community. These insights will provide valuable information for the ecological conservation of seagrass beds.

• Publisher: BioMed Central,BioMed Central Ltd,Springer Nature B.V,BMC
• Subject: Aquatic plants / Assembly / Bacteria / Bacteria - classification / Bacteria - genetics / Bacteria - isolation & purification / Beds (process engineering) / Biogeochemistry / Biological Microscopy / Biomarkers / Biomedical and Life Sciences / Carbon / Distribution / Ecosystem / Environmental aspects / Geologic Sediments - microbiology / High-Throughput Nucleotide Sequencing / Homogenization / Information processing / Life Sciences / Marine bacteria / Marine sediments / Microbial activity / Microbial colonies / Microbiological research / Microbiology / Microbiota / Microorganisms / Mycology / Next-generation sequencing / Nitrogen / Parasitology / Phylogenetics / Phylogeny / Rhizosphere / Rhizosphere bacteria / Rhizosphere microorganisms / RNA, Ribosomal, 16S - genetics / Sea grasses / Seagrass (Zostera marina) bed / Seagrass presence / Seasonal variations / Seasons / Sediments / Stability / Stochastic processes / Variance analysis / Veganism / Virology / Zostera marina / Zosteraceae - microbiology