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Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand

by Phookamsak, Rungtiwa , Mortimer, Peter E. , Promputtha, Itthayakorn , Li, Junfu , Jeewon, Rajesh , Doilom, Mingkwan

in Agroforestry / Ascomycota - classification / Ascomycota - genetics / Ascomycota - physiology / Bayes Theorem / Bayesian analysis / Biodiversity / Biogeography / Biology and Life Sciences / Computer and Information Sciences / Computer software industry / Conidia / Cryptococcus - classification / Cryptococcus - genetics / Cryptococcus - physiology / Deoxyribonucleic acid / DNA / DNA, Fungal - chemistry / DNA, Fungal - metabolism / Fungi / Gene sequencing / Genes / Laboratories / Litter / Microscopy / Morphology / Nucleotide sequence / Phylogenetics / Phylogeny / Research and Analysis Methods / RNA polymerase / Sequence Analysis, DNA / Species / Statistical inference / Taxonomy / Thailand / Thermal cycling

2020

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Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand

by Phookamsak, Rungtiwa , Mortimer, Peter E. , Promputtha, Itthayakorn , Li, Junfu , Jeewon, Rajesh , Doilom, Mingkwan

2020

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Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand

by Phookamsak, Rungtiwa , Mortimer, Peter E. , Promputtha, Itthayakorn , Li, Junfu , Jeewon, Rajesh , Doilom, Mingkwan

2020

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Journal Article

Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand

Phookamsak, Rungtiwa,

Mortimer, Peter E.,

Promputtha, Itthayakorn,

Li, Junfu,

Jeewon, Rajesh,

Doilom, Mingkwan

2020

Overview

During our studies on asexual fungi colonizing herbaceous litter in northern Thailand, we discovered two new fungal species, viz. Dendryphion hydei and Torula hydei spp. nov. The latter are examined, and their morphological characters are described as well as their DNA sequences from ribosomal and protein coding genes are analysed to infer their phylogenetic relationships with extant fungi. Torula hydei is different from other similar Torula species in having tiny and catenate conidia. Dendryphion hydei can be distinguished from other similar Dendryphion species in having large conidiophores and subhyaline to pale olivaceous brown, 2-4(-5)-septate conidia. Multigene phylogenetic analyses of a combined LSU, SSU, TEF1-α, RPB2 and ITS DNA sequence dataset generated from maximum likelihood and Bayesian inference analyses indicate that T. hydei forms a distinct lineage and basal to T. fici. Dendryphion hydei forms a distinct lineage and basal to D. europaeum, D. comosum, D. aquaticum and D. fluminicola within Torulaceae (Pleosporales, Dothideomycetes).

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Publisher

Public Library of Science,Public Library of Science (PLoS)

Subject

Agroforestry

/ Ascomycota - classification

/ Ascomycota - genetics

/ Ascomycota - physiology

/ Bayes Theorem

/ Bayesian analysis

/ Biodiversity