Journal Article

Assessing Weather-Yield Relationships in Rice at Local Scale Using Data Mining Approaches

Dorado, Hugo, Delerce, Sylvain, Jiménez, Daniel, Prager, Steven D., Garcés Varón, Gabriel, Grillon, Alexandre, Rebolledo, Maria Camila, Patiño, Victor Hugo

2016

Overview

Seasonal and inter-annual climate variability have become important issues for farmers, and climate change has been shown to increase them. Simultaneously farmers and agricultural organizations are increasingly collecting observational data about in situ crop performance. Agriculture thus needs new tools to cope with changing environmental conditions and to take advantage of these data. Data mining techniques make it possible to extract embedded knowledge associated with farmer experiences from these large observational datasets in order to identify best practices for adapting to climate variability. We introduce new approaches through a case study on irrigated and rainfed rice in Colombia. Preexisting observational datasets of commercial harvest records were combined with in situ daily weather series. Using Conditional Inference Forest and clustering techniques, we assessed the relationships between climatic factors and crop yield variability at the local scale for specific cultivars and growth stages. The analysis showed clear relationships in the various location-cultivar combinations, with climatic factors explaining 6 to 46% of spatiotemporal variability in yield, and with crop responses to weather being non-linear and cultivar-specific. Climatic factors affected cultivars differently during each stage of development. For instance, one cultivar was affected by high nighttime temperatures in the reproductive stage but responded positively to accumulated solar radiation during the ripening stage. Another was affected by high nighttime temperatures during both the vegetative and reproductive stages. Clustering of the weather patterns corresponding to individual cropping events revealed different groups of weather patterns for irrigated and rainfed systems with contrasting yield levels. Best-suited cultivars were identified for some weather patterns, making weather-site-specific recommendations possible. This study illustrates the potential of data mining for adding value to existing observational data in agriculture by allowing embedded knowledge to be quickly leveraged. It generates site-specific information on cultivar response to climatic factors and supports on-farm management decisions for adaptation to climate variability.

• Publisher: Public Library of Science,Public Library of Science (PLoS)
• Subject: Agricultural production / Agriculture / Analysis / Biology and Life Sciences / Caretta caretta / Case studies / Climate / Climate adaptation / Climate Change / Climate variability / Cluster Analysis / Clustering / Colombia / Computer and Information Sciences / Crop yield / Crops / Crops, Agricultural / Cultivars / Daily weather / Data Collection / Data Mining / Data processing / Datasets / Developmental stages / Earth Sciences / Environmental aspects / Environmental assessment / Environmental changes / Environmental conditions / Farm management / Farmers / Geography / Influence / Irrigation systems / Machine Learning / Methods / Night / Nighttime / Oryza / Oryza - growth & development / Production processes / Rainfed farming / Regression Analysis / Research and Analysis Methods / Rice / Ripening / Seasonal variability / Seasons / Solar radiation / Temperature / Variability / Weather / Weather patterns