Journal Article

Responses of soil and rhizosphere microbial communities to Cd-hyperaccumulating willows and Cd contamination

Zhou, Jie, Wang, Pu, Zhang, RuiQing, Gao, Yunpeng, Zhang, Jue

2024

Overview

Background The pollution of soil by heavy metals, particularly Cd, is constitutes a critical international environmental concern. Willow species are renowned for their efficacy in the phytoremediation of heavy metals owing to their high Cd absorption rate and rapid growth. However, the mechanisms underlying microbial regulation for high- and low-accumulating willow species remain poorly understood. Therefore, we investigated the responses of soil and rhizosphere microbial communities to high- and low-Cd-accumulating willows and Cd contamination. We analyzed soil properties were analyzed in bulk soil (SM) and rhizosphere soil (RM) planted with high-accumulating (H) and low-accumulating (L) willow species. Results Rhizosphere soil for different willow species had more NH 4+ than that of bulk soil, and RM-H soil had more than RM-L had. The available phosphorus content was greater in hyper-accumulated species than it was in lower-accumulated species, especially in RM-H. Genome sequencing of bacterial and fungal communities showed that RM-L exhibited the highest bacterial diversity, whereas RM-H displayed the greatest richness than the other groups. SM-L exhibited the highest diversity and richness of fungal communities. Ralstonia emerged as the predominant bacterium in RM-H, whereas Basidiomycota and Cercozoa were the most enriched fungi in SM-H. Annotation of the N and C metabolism pathways revealed differential patterns: expression levels of NRT2 , NarB , nirA , nirD , nrfA , and nosZ were highest in RM-H, demonstrating the effects of NO 3 - and N on the high accumulation of Cd in RM-H. The annotated genes associated with C metabolism indicated a preference for the tricarboxylic pathway in RM-H, whereas the hydroxypropionate-hydroxybutyrate cycle was implicated in C sequestration in SM-L. Conclusions These contribute to elucidation of the mechanism underlying high Cd accumulation in willows, particularly in respect of the roles of microbes and N and C utilization. This will provide valuable insights for repairing polluted soil using N and employing organic acids to improve heavy metal remediation efficiency.

• Publisher: BioMed Central,BioMed Central Ltd,Springer Nature B.V,BMC
• Subject: absorption / Accumulation / Agricultural research / Agriculture / Analysis / Annotations / Bacteria / Bacteria - classification / Bacteria - genetics / Bacteria - metabolism / Bacterial community / Basidiomycota / Biodegradation, Environmental / Biomass / Biomedical and Life Sciences / Bulk soil / Cadmium / Cadmium - metabolism / Cercozoa / CO2 fixation / Contamination / Environmental aspects / Environmental perception / Fungal community / Fungi / Fungi - genetics / Fungi - metabolism / Gene sequencing / genome / Genomics / Heavy metals / High-accumulating willow / Life Sciences / metabolism / Microbial activity / Microbiomes / Microbiota / Microorganisms / N metabolism / Organic acids / phosphorus content / Physiological aspects / Phytoremediation / Plant Sciences / polluted soils / Pollution / Quality control / Ralstonia / Rhizosphere / Salix / Salix - metabolism / Salix - microbiology / Soil - chemistry / Soil analysis / Soil contamination / Soil Microbiology / Soil microorganisms / Soil Pollutants - metabolism / Soil pollution / Soil properties / Soil remediation / Species / Tree Biology / Whole genome sequencing / Willows